RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 UBXN1Q04323 297 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 DOC2BQ14184 412 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 KRT31Q15323 416 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 IL17AQ16552 155 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 INF2Q27J81 1249 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 FIGNQ5HY92 759 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 FKBP15Q5T1M5 1219 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 MFSD14CQ5VZR4 134 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 PPP4R3AQ6IN85 833 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 TMCO3Q6UWJ1 677 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 GADL1Q6ZQY3 521 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 APTXQ7Z2E3 356 aaKnown RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 CCDC170Q8IYT3 715 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 KRT222Q8N1A0 295 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 REXO1Q8N1G1 1221 aaKnown RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 FBXL6Q8N531 539 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 SLC44A5Q8NCS7 719 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 EDAQ92838 391 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 CDK5RAP3Q96JB5 506 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 NUP88Q99567 741 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 APBA2Q99767 749 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 GRIP2Q9C0E4 1043 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 GBP3Q9H0R5 595 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 BLZF1Q9H2G9 400 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 DHX36Q9H2U1 1008 aaKnown RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 HAUS4Q9H6D7 363 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 TMEM39AQ9NV64 488 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 EXOC1Q9NV70 894 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 MTMR4Q9NYA4 1195 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 LMCD1Q9NZU5 365 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 SERPINA10Q9UK55 444 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 CAPN11Q9UMQ6 739 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 CTNND2Q9UQB3 1225 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 YBX2Q9Y2T7 364 aaKnown RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 LUC7L2Q9Y383 392 aaKnown RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 BAZ2BQ9UIF8 2168 aaKnown RBP5.6□□□□□ -1.51
PTPRK-213ENST00000490332 WDR87Q6ZQQ6 2873 aa5.6□□□□□ -1.51
PTPRK-213ENST00000490332 FLT1P17948 1338 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 IGKV6D-41A0A0C4DH26 115 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 A0A1W2PQJ5 194 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CTAGE9A4FU28 777 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 LGALS16A8MUM7 142 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 SPATA31C2B4DYI2 1134 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 F8W031 263 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 MEN1O00255 615 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CYTH3O43739 400 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 KLRC4O43908 158 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 MARCH6O60337 910 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 ERLIN1O75477 346 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TIMP1P01033 207 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 F11P03951 625 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 SNHG28P0DPA3 235 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CASP14P31944 242 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 KRT9P35527 623 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CYLC1P35663 651 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CLK2P49760 499 aaKnown RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 USP11P51784 963 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CBX1P83916 185 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 ZP2Q05996 745 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 GABPAQ06546 454 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 PDE4DQ08499 809 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 GPS2Q13227 327 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 UBAP2LQ14157 1087 aaKnown RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 KARSQ15046 597 aaKnown RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 BRD3Q15059 726 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CALCRLQ16602 461 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 WHAMMP3Q1A5X7 153 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 ERCC6LQ2NKX8 1250 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 LETM2Q2VYF4 491 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 GJC2Q5T442 439 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 KRT79Q5XKE5 535 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 MFSD5Q6N075 450 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 UNC13DQ70J99 1090 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CCDC84Q86UT8 332 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 FAM83AQ86UY5 434 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TMEM199Q8N511 208 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CERS5Q8N5B7 392 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 MB21D1Q8N884 522 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CPLX3Q8WVH0 158 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 GOLGA1Q92805 767 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 P2RX5Q93086 422 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 MKL1Q969V6 931 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 CEP95Q96GE4 821 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 RPGRIP1Q96KN7 1286 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TOX2Q96NM4 488 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TSG101Q99816 390 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TRIM9Q9C026 710 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 NT5C3AQ9H0P0 336 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 EHD4Q9H223 541 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 VPS16Q9H269 839 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TDRD3Q9H7E2 651 aaKnown RBP5.59□□□□□ -1.51
PTPRK-213ENST00000490332 RIC8AQ9NPQ8 531 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 USP40Q9NVE5 1235 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 FAM53CQ9NYF3 392 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 TMOD2Q9NZR1 351 aa5.59□□□□□ -1.51
PTPRK-213ENST00000490332 LRWD1Q9UFC0 647 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms