RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	AK8	Q96MA6	479 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	NFKBIZ	Q9BYH8	718 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	TMEM117	Q9H0C3	514 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	MINDY3	Q9H8M7	445 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	GPRC5C	Q9NQ84	441 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	AAAS	Q9NRG9	546 aa		12.3	□□□□□ -0.44
GGA1-222	ENST00000489772	PTPRS	Q13332	1948 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	STX6	O43752	255 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	EYA4	O95677	639 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	RAB27A	P51159	221 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	REST	Q13127	1097 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	SF3A1	Q15459	793 aa	Known RBP	12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	SKIV2L	Q15477	1246 aa	Known RBP	12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	NAALADL2	Q58DX5	795 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	RSPH1	Q8WYR4	309 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	MRPL38	Q96DV4	380 aa	Known RBP	12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	CDK5RAP3	Q96JB5	506 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	MMTAG2	Q9BU76	263 aa	Known RBP	12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	NT5C3A	Q9H0P0	336 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	FAM105A	Q9NUU6	356 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	MTMR6	Q9Y217	621 aa		12.29	□□□□□ -0.44
GGA1-222	ENST00000489772	GBF1	Q92538	1859 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772		A0A0C4DFX4	3053 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	UNC80	Q8N2C7	3258 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	LRRIQ4	A6NIV6	560 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772		E9PMD0	336 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	PDIA4	P13667	645 aa	Known RBP	12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	AXL	P30530	894 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	HOXA11	P31270	313 aa	Predicted RBP	12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	UBA7	P41226	1012 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	MBTD1	Q05BQ5	628 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	NOTUM	Q6P988	496 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	ZNF598	Q86UK7	904 aa	Known RBP	12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	ZBTB8OS	Q8IWT0	167 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	LRRC43	Q8N309	656 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	KIFAP3	Q92845	792 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	P2RX5	Q93086	422 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	PGBD4	Q96DM1	585 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	CCDC51	Q96ER9	411 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	IFT74	Q96LB3	600 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	CASD1	Q96PB1	797 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	C2orf40	Q9H1Z8	148 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	TYW1	Q9NV66	732 aa	Known RBP	12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	PCDHB2	Q9Y5E7	798 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	PCDHB12	Q9Y5F1	795 aa		12.28	□□□□□ -0.44
GGA1-222	ENST00000489772	TTC3	P53804	2025 aa		12.27	□□□□□ -0.44
GGA1-222	ENST00000489772	EVPL	Q92817	2033 aa		12.27	□□□□□ -0.44
GGA1-222	ENST00000489772	SLC26A4	O43511	780 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	TSPAN1	O60635	241 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	ZNF623	O75123	536 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	LONP1	P36776	959 aa	Known RBP	12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	PPP2R5A	Q15172	486 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	CSPP1	Q1MSJ5	1256 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	TIGD5	Q53EQ6	642 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	CLLU1OS	Q5K130	101 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	HYI	Q5T013	277 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	GLB1L	Q6UWU2	654 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	CABP7	Q86V35	215 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	DEPTOR	Q8TB45	409 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	HELQ	Q8TDG4	1101 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	CALML4	Q96GE6	196 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	MRPL9	Q9BYD2	267 aa	Known RBP	12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	LMAN2L	Q9H0V9	348 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	RNF19A	Q9NV58	838 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	PLAGL2	Q9UPG8	496 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	CLIC4	Q9Y696	253 aa		12.27	□□□□□ -0.45
GGA1-222	ENST00000489772	GRM6	O15303	877 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	SSB	P05455	408 aa	Known RBP eCLIP	12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	ATF7	P17544	494 aa	Predicted RBP	12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	LAG3	P18627	525 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	NAMPT	P43490	491 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	LONRF3	Q496Y0	759 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	UBXN11	Q5T124	520 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	RINT1	Q6NUQ1	792 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	FAM173B	Q6P4H8	233 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	LRRC55	Q6ZSA7	311 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	KLHL23	Q8NBE8	558 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	CNNM3	Q8NE01	707 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	RASSF8	Q8NHQ8	419 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	PRIMPOL	Q96LW4	560 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	DRC1	Q96MC2	740 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	PNMA5	Q96PV4	448 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	PLIN2	Q99541	437 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	TIPIN	Q9BVW5	301 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	ALG13	Q9NP73	1137 aa	Known RBP	12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	UBN1	Q9NPG3	1134 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	PRDM6	Q9NQX0	595 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	THEG	Q9P2T0	379 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	PRUNE2	Q8WUY3	3088 aa		12.26	□□□□□ -0.45
GGA1-222	ENST00000489772	ITGB1	P05556	798 aa		12.25	□□□□□ -0.45
GGA1-222	ENST00000489772	PLA2G4B	P0C869	781 aa		12.25	□□□□□ -0.45
GGA1-222	ENST00000489772	ARF4	P18085	180 aa	Predicted RBP	12.25	□□□□□ -0.45
GGA1-222	ENST00000489772	CEBPZ	Q03701	1054 aa	Known RBP	12.25	□□□□□ -0.45
GGA1-222	ENST00000489772	PTPA	Q15257	358 aa		12.25	□□□□□ -0.45
GGA1-222	ENST00000489772	MAPK6	Q16659	721 aa		12.25	□□□□□ -0.45
GGA1-222	ENST00000489772	AMHR2	Q16671	573 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms