RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 COLGALT1Q8NBJ5 622 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 HELQQ8TDG4 1101 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 UHRF1Q96T88 793 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-217ENST00000489719 MINDY3Q9H8M7 445 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 AGPAT5Q9NUQ2 364 aa19.82■□□□□ 0.76
ABCF3-217ENST00000489719 PUF60Q9UHX1 559 aaKnown RBP19.82■□□□□ 0.76
ABCF3-217ENST00000489719 ARHGEF35A5YM69 484 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 FGF18O76093 207 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 KRT17Q04695 432 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 LONRF3Q496Y0 759 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 CLLU1OSQ5K130 101 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 POTEGQ6S5H5 508 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 DTHD1Q6ZMT9 781 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 LRRC55Q6ZSA7 311 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 MCPH1Q8NEM0 835 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 RSPH1Q8WYR4 309 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 PABPC5Q96DU9 382 aaKnown RBP19.81■□□□□ 0.76
ABCF3-217ENST00000489719 ZNF558Q96NG5 402 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 MRPL9Q9BYD2 267 aaKnown RBP19.81■□□□□ 0.76
ABCF3-217ENST00000489719 POLR3FQ9H1D9 316 aaPredicted RBP19.81■□□□□ 0.76
ABCF3-217ENST00000489719 IGFLR1Q9H665 355 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 PCDHB2Q9Y5E7 798 aa19.81■□□□□ 0.76
ABCF3-217ENST00000489719 INO80B-WBP1J3KQ70 363 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 ATF7P17544 494 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-217ENST00000489719 DNAJB1P25685 340 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 AXLP30530 894 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 CAMK1Q14012 370 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 LEXMQ3ZCV2 418 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 KCNT2Q6UVM3 1135 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 GLB1LQ6UWU2 654 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 ASAP3Q8TDY4 903 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 LPPQ93052 612 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.8■□□□□ 0.76
ABCF3-217ENST00000489719 CLDND1Q9NY35 253 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 HCSTQ9UBK5 93 aa19.8■□□□□ 0.76
ABCF3-217ENST00000489719 TNFRSF10AO00220 468 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 GLRA2P23416 452 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 HOXA11P31270 313 aaPredicted RBP19.79■□□□□ 0.76
ABCF3-217ENST00000489719 PRPHP41219 470 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 ALDH7A1P49419 539 aaKnown RBP19.79■□□□□ 0.76
ABCF3-217ENST00000489719 KRT79Q5XKE5 535 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 PADI6Q6TGC4 694 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 IFNLR1Q8IU57 520 aaPredicted RBP19.79■□□□□ 0.76
ABCF3-217ENST00000489719 CNNM3Q8NE01 707 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 SPG21Q9NZD8 308 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 KIAA1024Q9UPX6 916 aa19.79■□□□□ 0.76
ABCF3-217ENST00000489719 CYP11B2P19099 503 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 PPM1AP35813 382 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 PLCB3Q01970 1234 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 RNASELQ05823 741 aaKnown RBP19.78■□□□□ 0.76
ABCF3-217ENST00000489719 HYAL1Q12794 435 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 CAPSQ13938 189 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 PUS10Q3MIT2 529 aaKnown RBP19.78■□□□□ 0.76
ABCF3-217ENST00000489719 NOMO2Q5JPE7 1267 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 PDE12Q6L8Q7 609 aaKnown RBP19.78■□□□□ 0.76
ABCF3-217ENST00000489719 NOTUMQ6P988 496 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 MRPL10Q7Z7H8 261 aaKnown RBP19.78■□□□□ 0.76
ABCF3-217ENST00000489719 IGSF22Q8N9C0 903 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 SNX29Q8TEQ0 813 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 MRPS27Q92552 414 aaKnown RBP19.78■□□□□ 0.76
ABCF3-217ENST00000489719 NFKBIZQ9BYH8 718 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 GPRC5CQ9NQ84 441 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 TLR9Q9NR96 1032 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 DNM3Q9UQ16 869 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 LZTS1Q9Y250 596 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 INPP5FQ9Y2H2 1132 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
ABCF3-217ENST00000489719 WDR81Q562E7 1941 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 LRRIQ4A6NIV6 560 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 H3BQ06 376 aaPredicted RBP19.77■□□□□ 0.76
ABCF3-217ENST00000489719 OFD1O75665 1012 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 IRS1P35568 1242 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 ZBTB8OSQ8IWT0 167 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 URGCPQ8TCY9 931 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 CCDC51Q96ER9 411 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 TLE6Q9H808 572 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 UBN1Q9NPG3 1134 aa19.77■□□□□ 0.76
ABCF3-217ENST00000489719 DDX19AQ9NUU7 478 aaKnown RBP19.77■□□□□ 0.76
ABCF3-217ENST00000489719 CARNS1A5YM72 827 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 TSPAN1O60635 241 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 MBTD1Q05BQ5 628 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 CUL4AQ13619 759 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 ECM1Q16610 540 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 RBM23Q86U06 439 aaKnown RBP19.76■□□□□ 0.75
ABCF3-217ENST00000489719 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.76■□□□□ 0.75
ABCF3-217ENST00000489719 CPB2Q96IY4 423 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 CSRNP2Q9H175 543 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 BHMT2Q9H2M3 363 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 KANSL3Q9P2N6 904 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 FAM50BQ9Y247 325 aa19.76■□□□□ 0.75
ABCF3-217ENST00000489719 COL4A4P53420 1690 aaPredicted RBP19.75■□□□□ 0.75
ABCF3-217ENST00000489719 ITGA4P13612 1032 aa19.75■□□□□ 0.75
ABCF3-217ENST00000489719 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
ABCF3-217ENST00000489719 PDCP20941 246 aa19.75■□□□□ 0.75
ABCF3-217ENST00000489719 GTF2F1P35269 517 aaKnown RBP eCLIP19.75■□□□□ 0.75
ABCF3-217ENST00000489719 PBX3P40426 434 aa19.75■□□□□ 0.75
ABCF3-217ENST00000489719 NRIP1P48552 1158 aa19.75■□□□□ 0.75
ABCF3-217ENST00000489719 BCAR1P56945 870 aa19.75■□□□□ 0.75
ABCF3-217ENST00000489719 ERVFC1P60507 584 aa19.75■□□□□ 0.75
ABCF3-217ENST00000489719 ADAM15Q13444 863 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms