RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CHURC1-FNTBB4DL54 471 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 GALTP07902 379 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 SPATA31D3P0C874 917 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 FNTBP49356 437 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 HAND2P61296 217 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 ALX1Q15699 326 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 CCDC6Q16204 474 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 SPATA31D4Q6ZUB0 917 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 PLPPR4Q7Z2D5 763 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 PDZD3Q86UT5 571 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-233ENST00000489352 NT5C3AQ9H0P0 336 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 PLEKHA4Q9H4M7 779 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 CDH7Q9ULB5 785 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 LAMA1P25391 3075 aa13.18□□□□□ -0.3
HDAC6-233ENST00000489352 UNC79Q9P2D8 2635 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 MAN2B1O00754 1011 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 FOXP2O15409 715 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 SEC24BO95487 1268 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 FGAP02671 866 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 TDGF1P13385 188 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
HDAC6-233ENST00000489352 MTMR1Q13613 665 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 C19orf48Q6RUI8 117 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 METTL13Q8N6R0 699 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 BCL7CQ8WUZ0 217 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-233ENST00000489352 ZNF707Q96C28 371 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-233ENST00000489352 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-233ENST00000489352 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 CHRDQ9H2X0 955 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 ADAMTS10Q9H324 1103 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 JPH1Q9HDC5 661 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-233ENST00000489352 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 SLC9A2Q9UBY0 812 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
HDAC6-233ENST00000489352 MYH9P35579 1960 aaKnown RBP13.16□□□□□ -0.3
HDAC6-233ENST00000489352 GAS2O43903 313 aaKnown RBP13.16□□□□□ -0.3
HDAC6-233ENST00000489352 HBP1O60381 514 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 VTNP04004 478 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 ALDH2P05091 517 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 SLC26A2P50443 739 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 DAB2IPQ5VWQ8 1189 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 HEATR6Q6AI08 1181 aaKnown RBP13.16□□□□□ -0.3
HDAC6-233ENST00000489352 LONP2Q86WA8 852 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 PALB2Q86YC2 1186 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 SIRT2Q8IXJ6 389 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 RPS6KC1Q96S38 1066 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 PCYT2Q99447 389 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 KXD1Q9BQD3 176 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 HEBP1Q9NRV9 189 aa13.16□□□□□ -0.3
HDAC6-233ENST00000489352 GIPC1O14908 333 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 TEX28O15482 410 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 MAFGO15525 162 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
HDAC6-233ENST00000489352 SLC11A1P49279 550 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 ZNF484Q5JVG2 852 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-233ENST00000489352 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 VN1R3Q9BXE9 311 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 LMAN1LQ9HAT1 526 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 IGSF5Q9NSI5 407 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 AKT3Q9Y243 479 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 FAN1Q9Y2M0 1017 aa13.15□□□□□ -0.3
HDAC6-233ENST00000489352 BACH1O14867 736 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 LILRB3O75022 631 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 GPR32O75388 356 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 SKIP12755 728 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
HDAC6-233ENST00000489352 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
HDAC6-233ENST00000489352 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 FZD5Q13467 585 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 GRASPQ7Z6J2 395 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-233ENST00000489352 ZNF598Q86UK7 904 aaKnown RBP13.14□□□□□ -0.31
HDAC6-233ENST00000489352 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 FGF13Q92913 245 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 MTMR8Q96EF0 704 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 LOXL4Q96JB6 756 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 PIGSQ96S52 555 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 COL1A2P08123 1366 aa13.14□□□□□ -0.31
HDAC6-233ENST00000489352 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
HDAC6-233ENST00000489352 SOD2P04179 222 aa13.13□□□□□ -0.31
HDAC6-233ENST00000489352 TMOD1P28289 359 aa13.13□□□□□ -0.31
HDAC6-233ENST00000489352 GLUD2P49448 558 aa13.13□□□□□ -0.31
HDAC6-233ENST00000489352 ACTR2P61160 394 aa13.13□□□□□ -0.31
HDAC6-233ENST00000489352 SATB1Q01826 763 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms