RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TCP11Q8WWU5 503 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PSPC1Q8WXF1 523 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 JPH2Q9BR39 696 aaPredicted RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 SAGE1Q9NXZ1 904 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 COL1A2P08123 1366 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 SEPT4O43236 478 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 GJB1P08034 283 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 KLRC1P26715 233 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
COL21A1-211ENST00000488912 CYP2J2P51589 502 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 CHMP4BP1P59074 171 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 LAMTOR4Q0VGL1 99 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 GRIK4Q16099 956 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 MAN2A1Q16706 1144 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 BRDTQ58F21 947 aaPredicted RBP11.97□□□□□ -0.49
COL21A1-211ENST00000488912 DEPTORQ8TB45 409 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 PPP1R13LQ8WUF5 828 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 ZNF830Q96NB3 372 aaPredicted RBP11.97□□□□□ -0.49
COL21A1-211ENST00000488912 IMPACTQ9P2X3 320 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 ZKSCAN5Q9Y2L8 839 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 DNAH12Q6ZR08 3092 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 H0YCG3 227 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 ADCY3O60266 1144 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 FKTNO75072 461 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 MYL3P08590 195 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 C6orf222P0C671 652 aaPredicted RBP11.97□□□□□ -0.49
COL21A1-211ENST00000488912 KIAA0753Q2KHM9 967 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 RHPN2Q8IUC4 686 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 TRIM59Q8IWR1 403 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 ERO1AQ96HE7 468 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 CBWD1Q9BRT8 395 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 DMAC2Q9NW81 257 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 SUCLA2Q9P2R7 463 aaPredicted RBP11.97□□□□□ -0.49
COL21A1-211ENST00000488912 EXOC7Q9UPT5 735 aa11.97□□□□□ -0.49
COL21A1-211ENST00000488912 ANKRD63C9JTQ0 380 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.49
COL21A1-211ENST00000488912 PGK1P00558 417 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 GNRH1P01148 92 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 HMGCRP04035 888 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 MXD4Q14582 209 aaPredicted RBP11.96□□□□□ -0.49
COL21A1-211ENST00000488912 MFSD10Q14728 455 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 MARCH8Q5T0T0 291 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 SLC39A4Q6P5W5 647 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 MTHFD1LQ6UB35 978 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 SLC9A9Q8IVB4 645 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 LINC01465Q8N7H1 131 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 RETREG2Q8NC44 543 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 RAET1EQ8TD07 263 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 KCNF1Q9H3M0 494 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 NDST4Q9H3R1 872 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 SETD4Q9NVD3 440 aa11.96□□□□□ -0.49
COL21A1-211ENST00000488912 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.5
COL21A1-211ENST00000488912 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 MAGEB2O15479 319 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 RARBP10826 455 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ADSSP30520 456 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 DNM2P50570 870 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 GJA9P57773 515 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 PURAQ00577 322 aaKnown RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 TBX2Q13207 712 aaPredicted RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ARMCX5Q6P1M9 558 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 FRMD5Q7Z6J6 570 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 C12orf56Q8IXR9 622 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 KCNN1Q92952 543 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ZNF668Q96K58 619 aaPredicted RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 PCIF1Q9H4Z3 704 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 TMEM51Q9NW97 253 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 CGNQ9P2M7 1197 aaKnown RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ARMCX3Q9UH62 379 aaPredicted RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 PHLPP2Q6ZVD8 1323 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 K7ERI5 159 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 HAS3O00219 553 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 EDN1P05305 212 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ABCD1P33897 745 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 PSEN2P49810 448 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 GNASQ5JWF2 1037 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 MAP3K21Q5TCX8 1036 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 CDCA2Q69YH5 1023 aaPredicted RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 FAM186BQ8IYM0 893 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ZSWIM2Q8NEG5 633 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 CACTINQ8WUQ7 758 aaKnown RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 TMEM174Q8WUU8 243 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 BICD1Q96G01 975 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 NLRP4Q96MN2 994 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 UPF3AQ9H1J1 476 aaKnown RBP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 HSPBP1Q9NZL4 362 aa11.95□□□□□ -0.5
COL21A1-211ENST00000488912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL21A1-211ENST00000488912 ITIH6Q6UXX5 1313 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms