RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SCRN1Q12765 414 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 PTPN21Q16825 1174 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 LONRF3Q496Y0 759 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 PPP4R3AQ6IN85 833 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 GLB1LQ6UWU2 654 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 SUGP1Q8IWZ8 645 aaKnown RBP20.64■□□□□ 0.89
HDAC6-231ENST00000488905 SLC7A3Q8WY07 619 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 FAM20AQ96MK3 541 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 ZBP1Q9H171 429 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 TBC1D13Q9NVG8 400 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 CDH22Q9UJ99 828 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 COL4A3BPQ9Y5P4 624 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 MYO15AQ9UKN7 3530 aa20.64■□□□□ 0.89
HDAC6-231ENST00000488905 TDRD15B5MCY1 1934 aaKnown RBP20.64■□□□□ 0.89
HDAC6-231ENST00000488905 C2orf16Q68DN1 1984 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-231ENST00000488905 MEIS3P2A8K0S8 358 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 DKC1O60832 514 aaKnown RBP eCLIP20.63■□□□□ 0.89
HDAC6-231ENST00000488905 CLASP2O75122 1294 aaKnown RBP20.63■□□□□ 0.89
HDAC6-231ENST00000488905 SP100P23497 879 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-231ENST00000488905 MRE11P49959 708 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 NPEPPSP55786 919 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 BMS1Q14692 1282 aaKnown RBP20.63■□□□□ 0.89
HDAC6-231ENST00000488905 VPS52Q8N1B4 723 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 IFT122Q9HBG6 1241 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 AGPAT5Q9NUQ2 364 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 WRAP73Q9P2S5 460 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-231ENST00000488905 INPP5FQ9Y2H2 1132 aa20.63■□□□□ 0.89
HDAC6-231ENST00000488905 XBP1P17861 261 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 POLGP54098 1239 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-231ENST00000488905 ITIH3Q06033 890 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 NOMO2Q5JPE7 1267 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 CES5AQ6NT32 575 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 ASIC4Q96FT7 647 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 IGSF21Q96ID5 467 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 LXNQ9BS40 222 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 SLKQ9H2G2 1235 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-231ENST00000488905 DHX33Q9H6R0 707 aaKnown RBP20.62■□□□□ 0.89
HDAC6-231ENST00000488905 NRDE2Q9H7Z3 1164 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 NR2E1Q9Y466 385 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 PPME1Q9Y570 386 aa20.62■□□□□ 0.89
HDAC6-231ENST00000488905 CCNT1O60563 726 aaKnown RBP20.61■□□□□ 0.89
HDAC6-231ENST00000488905 ZNF623O75123 536 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 P4HBP07237 508 aaKnown RBP20.61■□□□□ 0.89
HDAC6-231ENST00000488905 RNASELQ05823 741 aaKnown RBP20.61■□□□□ 0.89
HDAC6-231ENST00000488905 PIK3AP1Q6ZUJ8 805 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 EXOC8Q8IYI6 725 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 FBXL6Q8N531 539 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
HDAC6-231ENST00000488905 PRSS33Q8NF86 280 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 BCL7CQ8WUZ0 217 aaPredicted RBP20.61■□□□□ 0.89
HDAC6-231ENST00000488905 PSPC1Q8WXF1 523 aaKnown RBP20.61■□□□□ 0.89
HDAC6-231ENST00000488905 AUTS2Q8WXX7 1259 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 HAS1Q92839 578 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 CEP170P1Q96L14 293 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 NECTIN4Q96NY8 510 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 ADAM7Q9H2U9 754 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 POMKQ9H5K3 350 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 IRAK3Q9Y616 596 aa20.61■□□□□ 0.89
HDAC6-231ENST00000488905 TBX3O15119 743 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 OFD1O75665 1012 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 CXCL14O95715 111 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 GALTP07902 379 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 CTSAP10619 480 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 RFC5P40937 340 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 ZBTB33Q86T24 672 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 DDX53Q86TM3 631 aaKnown RBP20.6■□□□□ 0.89
HDAC6-231ENST00000488905 OXER1Q8TDS5 423 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 PGBD4Q96DM1 585 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 NAP1L4Q99733 375 aaKnown RBP20.6■□□□□ 0.89
HDAC6-231ENST00000488905 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 BMP2KQ9NSY1 1161 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-231ENST00000488905 GJB4Q9NTQ9 266 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 DZANK1Q9NVP4 752 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 DNAJB4Q9UDY4 337 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 PCDHB2Q9Y5E7 798 aa20.6■□□□□ 0.89
HDAC6-231ENST00000488905 GAS2O43903 313 aaKnown RBP20.59■□□□□ 0.89
HDAC6-231ENST00000488905 B4GALT3O60512 393 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 PFKFB2O60825 505 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 YWHABP31946 246 aaKnown RBP20.59■□□□□ 0.89
HDAC6-231ENST00000488905 SLC11A1P49279 550 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 GIT2Q14161 759 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 EMC2Q15006 297 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 EPHA7Q15375 998 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 IER5LQ5T953 404 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 NCAPH2Q6IBW4 605 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 C4orf19Q8IY42 314 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 TMEM87AQ8NBN3 555 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 URGCPQ8TCY9 931 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 PRPF31Q8WWY3 499 aaKnown RBP20.59■□□□□ 0.89
HDAC6-231ENST00000488905 TMEM143Q96AN5 459 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 PRRX2Q99811 253 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 MINDY3Q9H8M7 445 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 TPCN1Q9ULQ1 816 aa20.59■□□□□ 0.89
HDAC6-231ENST00000488905 DMDP11532 3685 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 PLXNA3P51805 1871 aa20.58■□□□□ 0.89
HDAC6-231ENST00000488905 VPS13AQ96RL7 3174 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms