RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 SPECC1LQ69YQ0 1117 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 EFCAB12Q6NXP0 572 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 ARMCX5Q6P1M9 558 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 CCDC186Q7Z3E2 898 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 RHPN2Q8IUC4 686 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 ZBTB8OSQ8IWT0 167 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 FAM186BQ8IYM0 893 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 CCDC150Q8NCX0 1101 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 LMBR1Q8WVP7 490 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 PRPF31Q8WWY3 499 aaKnown RBP7.58□□□□□ -1.2
PDAP1-203ENST00000488214 ZNF668Q96K58 619 aaPredicted RBP7.58□□□□□ -1.2
PDAP1-203ENST00000488214 SCLT1Q96NL6 688 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 MAP7D2Q96T17 732 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 CBWD1Q9BRT8 395 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 BEGAINQ9BUH8 593 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 KATNAL1Q9BW62 490 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 SPC25Q9HBM1 224 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 SUCLA2Q9P2R7 463 aaPredicted RBP7.58□□□□□ -1.2
PDAP1-203ENST00000488214 AKT3Q9Y243 479 aa7.58□□□□□ -1.2
PDAP1-203ENST00000488214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
PDAP1-203ENST00000488214 PDCD11Q14690 1871 aaKnown RBP7.58□□□□□ -1.2
PDAP1-203ENST00000488214 ITIH6Q6UXX5 1313 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 IGKV6-21A0A0C4DH24 114 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 MAGEB2O15479 319 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 AKAP3O75969 853 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PGK1P00558 417 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 GNRH1P01148 92 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 INHAP05111 366 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PRKCBP05771 671 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 SRGAP2CP0DJJ0 459 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 HARSP12081 509 aaKnown RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 SFPQP23246 707 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 ABCD1P33897 745 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PSMC2P35998 433 aaKnown RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 MATR3P43243 847 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 CASP4P49662 377 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 DNM2P50570 870 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 GSDMDP57764 484 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PURAQ00577 322 aaKnown RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 GOLGA8FQ08AF8 430 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 GOLGA8DPQ0D2H9 430 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 LAMTOR4Q0VGL1 99 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 MXD4Q14582 209 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 NR1I3Q14994 352 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 ARHGEF6Q15052 776 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 NFIL3Q16649 462 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 TMEM132AQ24JP5 1023 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 VWA3BQ502W6 1294 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 MIIPQ5JXC2 388 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 TCERG1LQ5VWI1 586 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 CDCA2Q69YH5 1023 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 MTHFD1LQ6UB35 978 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 TAS1R3Q7RTX0 852 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 RNF149Q8NC42 400 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 SLAIN1Q8ND83 568 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 KAT2BQ92831 832 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 ZNF830Q96NB3 372 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 FAM49AQ9H0Q0 323 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 UPF3AQ9H1J1 476 aaKnown RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 C2orf40Q9H1Z8 148 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 KCNF1Q9H3M0 494 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PCIF1Q9H4Z3 704 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 XPNPEP3Q9NQH7 507 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 SETD4Q9NVD3 440 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 HSPBP1Q9NZL4 362 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 CGNQ9P2M7 1197 aaKnown RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 ANKFY1Q9P2R3 1169 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 IMPACTQ9P2X3 320 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 ARMCX3Q9UH62 379 aaPredicted RBP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 FRMD4BQ9Y2L6 1034 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 Q9Y3F1 56 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 TRIM17Q9Y577 477 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDAP1-203ENST00000488214 PTCH2Q9Y6C5 1203 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 CITO14578 2027 aa7.57□□□□□ -1.2
PDAP1-203ENST00000488214 C17orf102A2RUQ5 167 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 GOLGA8IPA6NC78 632 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 GOLGA8JA6NMD2 632 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 ANKRD63C9JTQ0 380 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 INO80B-WBP1J3KQ70 363 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 ZEB2O60315 1214 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 VTNP04004 478 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 EDN1P05305 212 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 TPM1P09493 284 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 KRT13P13646 458 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 HSPA6P17066 643 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 SCP2P22307 547 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 KLRC1P26715 233 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 TMOD1P28289 359 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 PBX1P40424 430 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 PHKA2P46019 1235 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 KLK7P49862 253 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 EFNA5P52803 228 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 MARSP56192 900 aaKnown RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 GJA9P57773 515 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 LRMPQ12912 555 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms