RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ANKFY1Q9P2R3 1169 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 TOP3BO95985 862 aaKnown RBP13.37□□□□□ -0.27
TRIM56-204ENST00000487252 ITGB5P18084 799 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 RBM25P49756 843 aaKnown RBP13.37□□□□□ -0.27
TRIM56-204ENST00000487252 TRAF1Q13077 416 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 ZNF852Q6ZMS4 543 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 TPRG1Q6ZUI0 275 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 FAM160A2Q8N612 972 aaPredicted RBP13.37□□□□□ -0.27
TRIM56-204ENST00000487252 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 CCDC136Q96JN2 1154 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 KAT14Q9H8E8 782 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 CACNA2D2Q9NY47 1150 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 TENM4Q6N022 2769 aa13.37□□□□□ -0.27
TRIM56-204ENST00000487252 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 CAPNS1P04632 268 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
TRIM56-204ENST00000487252 NT5C2P49902 561 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 FOXC1Q12948 553 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 CCDC6Q16204 474 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 ELMSAN1Q6PJG2 1045 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 MTSS1LQ765P7 747 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 PRKD2Q9BZL6 878 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 AZI2Q9H6S1 392 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 MRPL17Q9NRX2 175 aaKnown RBP13.36□□□□□ -0.27
TRIM56-204ENST00000487252 TBC1D13Q9NVG8 400 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 ZDHHC7Q9NXF8 308 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 CDH7Q9ULB5 785 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 MRPS17Q9Y2R5 130 aaKnown RBP13.36□□□□□ -0.27
TRIM56-204ENST00000487252 GPSM3Q9Y4H4 160 aa13.36□□□□□ -0.27
TRIM56-204ENST00000487252 COL1A2P08123 1366 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 GIPC1O14908 333 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 TEX28O15482 410 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 B4GALT3O60512 393 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 EFEMP2O95967 443 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 GLUD1P00367 558 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 ADH1AP07327 375 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 SLC11A1P49279 550 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 SLC26A2P50443 739 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 CCR3P51677 355 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 STAT5BP51692 787 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 SRSF5Q13243 272 aaKnown RBP13.35□□□□□ -0.27
TRIM56-204ENST00000487252 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 PDZD3Q86UT5 571 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 ENAHQ8N8S7 591 aaPredicted RBP13.35□□□□□ -0.27
TRIM56-204ENST00000487252 RNF169Q8NCN4 708 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 ADAM32Q8TC27 787 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 ESR2Q92731 530 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 PHKBQ93100 1093 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
TRIM56-204ENST00000487252 RPS6KC1Q96S38 1066 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 PLEKHA4Q9H4M7 779 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 RXFP1Q9HBX9 757 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 DNAJB4Q9UDY4 337 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 NEDD4P46934 1319 aa13.35□□□□□ -0.27
TRIM56-204ENST00000487252 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
TRIM56-204ENST00000487252 SPAG17Q6Q759 2223 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 PALM3A6NDB9 673 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-204ENST00000487252 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 PAPSS2O95340 614 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-204ENST00000487252 NOVA1P51513 510 aaKnown RBP13.34□□□□□ -0.27
TRIM56-204ENST00000487252 HAND2P61296 217 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 PLA2G2CQ5R387 149 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 C12orf50Q8NA57 414 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-204ENST00000487252 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 PANK1Q8TE04 598 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 LOXL4Q96JB6 756 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 RIOX1Q9H6W3 641 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 JPH1Q9HDC5 661 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-204ENST00000487252 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 UBIAD1Q9Y5Z9 338 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 CELSR3Q9NYQ7 3312 aa13.34□□□□□ -0.27
TRIM56-204ENST00000487252 COL4A2P08572 1712 aa13.33□□□□□ -0.27
TRIM56-204ENST00000487252 MEIS2O14770 477 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 MAFGO15525 162 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 HBP1O60381 514 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 ATG7O95352 703 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 C22orf31O95567 290 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRIM56-204ENST00000487252 EIF4BP23588 611 aaKnown RBP13.33□□□□□ -0.28
TRIM56-204ENST00000487252 FSHRP23945 695 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.28
TRIM56-204ENST00000487252 PIGSQ96S52 555 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
TRIM56-204ENST00000487252 PPP1R16BQ96T49 567 aa13.33□□□□□ -0.28
TRIM56-204ENST00000487252 ADAMTS10Q9H324 1103 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms