RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CETN3O15182 167 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 EDIL3O43854 480 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 ENTPD5O75356 428 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 GFPT2O94808 682 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 TDP2O95551 362 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 ACSL3O95573 720 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 BRAFP15056 766 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 RASA1P20936 1047 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 NR2F2P24468 414 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 ANXA13P27216 316 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 GNA11P29992 359 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 CHRNA3P32297 505 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 STX2P32856 288 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.58
CCDC171-208ENST00000486641 PDIA5Q14554 519 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 ZNF568Q3ZCX4 644 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.58
CCDC171-208ENST00000486641 OLIG1Q8TAK6 271 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 RFFLQ8WZ73 363 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 ERP27Q96DN0 273 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 IFT43Q96FT9 208 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 MAGEB18Q96M61 343 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 SERPINB12Q96P63 405 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 TBC1D10AQ9BXI6 508 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 KIAA1683Q9H0B3 1180 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 TMX4Q9H1E5 349 aaPredicted RBP11.46□□□□□ -0.58
CCDC171-208ENST00000486641 SIX2Q9NPC8 291 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.58
CCDC171-208ENST00000486641 SEC63Q9UGP8 760 aaKnown RBP11.46□□□□□ -0.58
CCDC171-208ENST00000486641 PCYOX1Q9UHG3 505 aa11.46□□□□□ -0.58
CCDC171-208ENST00000486641 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 ZNF804BA4D1E1 1349 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 PITPNM2Q9BZ72 1349 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 KLRF2D3W0D1 207 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 ATP5HO75947 161 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 T-ENOLP0DO92 83 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 TAC1P20366 129 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 EPHB2P29323 1055 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 FOXN2P32314 431 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 IGHMBP2P38935 993 aaKnown RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 RANBP1P43487 201 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 CUL3Q13618 768 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 EPHA7Q15375 998 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 MUM1Q2TAK8 710 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 HERC4Q5GLZ8 1057 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 SEPT14Q6ZU15 432 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 FAM47EQ6ZV65 393 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 INTS8Q75QN2 995 aaKnown RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 GLYCTKQ8IVS8 523 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 SH3RF3Q8TEJ3 882 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 SLC7A6OSQ96CW6 309 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 ARHGEF26Q96DR7 871 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 RBM41Q96IZ5 413 aaKnown RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 RUNDC3BQ96NL0 473 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 PITPNM3Q9BZ71 974 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 VCXQ9H320 206 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 CDC42EP4Q9H3Q1 356 aaKnown RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 DENND2DQ9H6A0 471 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-208ENST00000486641 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 NHSL1Q5SYE7 1610 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 NCANO14594 1321 aa11.45□□□□□ -0.58
CCDC171-208ENST00000486641 TMEM253P0C7T8 217 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 ALAS1P13196 640 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 ADCY1Q08828 1119 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 WASHC2DQ5SRD0 308 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 IRGCQ6NXR0 463 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 CYP4X1Q8N118 509 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 INPP5DQ92835 1189 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 GJA10Q969M2 543 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 NSUN4Q96CB9 384 aaKnown RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 DYNLL2Q96FJ2 89 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 FGD4Q96M96 766 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 USP40Q9NVE5 1235 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 LMCD1Q9NZU5 365 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 COG5Q9UP83 839 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 PTPN22Q9Y2R2 807 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 NUP98P52948 1817 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 SIGLEC16A6NMB1 481 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 E9PMD0 336 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 SMAPO00193 183 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 EYA4O95677 639 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 CTNNA2P26232 953 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 POLGP54098 1239 aaPredicted RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 TNIP1Q15025 636 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 SETDB1Q15047 1291 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 DCAF17Q5H9S7 520 aaPredicted RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 SUSD4Q5VX71 490 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 TRMT10CQ7L0Y3 403 aaKnown RBP11.44□□□□□ -0.58
CCDC171-208ENST00000486641 FRMD5Q7Z6J6 570 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 GRAMD1AQ96CP6 724 aa11.44□□□□□ -0.58
CCDC171-208ENST00000486641 BICD1Q96G01 975 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms