RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 LRRC43Q8N309 656 aa23.35■■□□□ 1.33
LMBR1-217ENST00000485985 FBXL6Q8N531 539 aa23.35■■□□□ 1.33
LMBR1-217ENST00000485985 DYDC2Q96IM9 177 aa23.35■■□□□ 1.33
LMBR1-217ENST00000485985 NLRP4Q96MN2 994 aa23.35■■□□□ 1.33
LMBR1-217ENST00000485985 TCF25Q9BQ70 676 aa23.35■■□□□ 1.33
LMBR1-217ENST00000485985 DHX33Q9H6R0 707 aaKnown RBP23.35■■□□□ 1.33
LMBR1-217ENST00000485985 BRMS1Q9HCU9 246 aa23.35■■□□□ 1.33
LMBR1-217ENST00000485985 BMP2KQ9NSY1 1161 aaPredicted RBP23.35■■□□□ 1.33
LMBR1-217ENST00000485985 SFPQP23246 707 aaKnown RBP eCLIP23.34■■□□□ 1.33
LMBR1-217ENST00000485985 TECP42680 631 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 CDC42EP1Q00587 391 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 SIGLEC14Q08ET2 396 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 CTTNQ14247 550 aaKnown RBP23.34■■□□□ 1.33
LMBR1-217ENST00000485985 ANKRD54Q6NXT1 300 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 KCNT2Q6UVM3 1135 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 C4orf19Q8IY42 314 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 HELQQ8TDG4 1101 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 CEP170P1Q96L14 293 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 IFT122Q9HBG6 1241 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 NGRNQ9NPE2 291 aaKnown RBP23.34■■□□□ 1.33
LMBR1-217ENST00000485985 ENTPD7Q9NQZ7 604 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 DACT1Q9NYF0 836 aa23.34■■□□□ 1.33
LMBR1-217ENST00000485985 HIDE1A8MVS5 230 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 ZBTB39O15060 712 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 MARCH6O60337 910 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 DKC1O60832 514 aaKnown RBP eCLIP23.33■■□□□ 1.33
LMBR1-217ENST00000485985 YWHABP31946 246 aaKnown RBP23.33■■□□□ 1.33
LMBR1-217ENST00000485985 POLGP54098 1239 aaPredicted RBP23.33■■□□□ 1.33
LMBR1-217ENST00000485985 SYCE2Q6PIF2 218 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 ABI1Q8IZP0 508 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 SLC7A3Q8WY07 619 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 TMEM143Q96AN5 459 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 ZNF558Q96NG5 402 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 PHOX2BQ99453 314 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 PRRX2Q99811 253 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 PIN4Q9Y237 131 aaKnown RBP23.33■■□□□ 1.33
LMBR1-217ENST00000485985 COL4A3BPQ9Y5P4 624 aa23.33■■□□□ 1.33
LMBR1-217ENST00000485985 PPM1AP35813 382 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 PHKA2P46019 1235 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 PTPN5P54829 565 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 KRT17Q04695 432 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 LLGL2Q6P1M3 1020 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 JPH2Q9BR39 696 aaPredicted RBP23.32■■□□□ 1.32
LMBR1-217ENST00000485985 TRAIPQ9BWF2 469 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 CHST12Q9NRB3 414 aa23.32■■□□□ 1.32
LMBR1-217ENST00000485985 KMT2EQ8IZD2 1858 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
LMBR1-217ENST00000485985 EOMESO95936 686 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 RFC5P40937 340 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 EMC2Q15006 297 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 CALCRLQ16602 461 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 TWF2Q6IBS0 349 aaKnown RBP23.31■■□□□ 1.32
LMBR1-217ENST00000485985 PRPF31Q8WWY3 499 aaKnown RBP23.31■■□□□ 1.32
LMBR1-217ENST00000485985 LPPQ93052 612 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 ASIC4Q96FT7 647 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 APOL5Q9BWW9 433 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 MINDY3Q9H8M7 445 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 SPG21Q9NZD8 308 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 PPME1Q9Y570 386 aa23.31■■□□□ 1.32
LMBR1-217ENST00000485985 TDRD15B5MCY1 1934 aaKnown RBP23.3■■□□□ 1.32
LMBR1-217ENST00000485985 MEIS3P2A8K0S8 358 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 NEMFO60524 1076 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 BAG4O95429 457 aaKnown RBP23.3■■□□□ 1.32
LMBR1-217ENST00000485985 HOXB8P17481 243 aaPredicted RBP23.3■■□□□ 1.32
LMBR1-217ENST00000485985 TCF15Q12870 199 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 PTPN21Q16825 1174 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 LONRF3Q496Y0 759 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 CATSPER4Q7RTX7 472 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 TMC7Q7Z402 723 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 PSPC1Q8WXF1 523 aaKnown RBP23.3■■□□□ 1.32
LMBR1-217ENST00000485985 EIF2AK1Q9BQI3 630 aaKnown RBP23.3■■□□□ 1.32
LMBR1-217ENST00000485985 INO80BQ9C086 356 aaPredicted RBP23.3■■□□□ 1.32
LMBR1-217ENST00000485985 ZSWIM4Q9H7M6 989 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 AGPAT5Q9NUQ2 364 aa23.3■■□□□ 1.32
LMBR1-217ENST00000485985 SLITRK3O94933 977 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 GUCY1B3Q02153 619 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 LAMTOR4Q0VGL1 99 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 TRIM29Q14134 588 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 XKR9Q5GH70 373 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 CCDC83Q8IWF9 413 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 TPH2Q8IWU9 490 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 SLC39A11Q8N1S5 342 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 MTMR9Q96QG7 549 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 KIF2CQ99661 725 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 TTC12Q9H892 705 aaPredicted RBP23.29■■□□□ 1.32
LMBR1-217ENST00000485985 XPNPEP1Q9NQW7 623 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 FAM105AQ9NUU6 356 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 PCDHA12Q9UN75 941 aa23.29■■□□□ 1.32
LMBR1-217ENST00000485985 MRPL43Q8N983 215 aaKnown RBP23.28■■□□□ 1.32
LMBR1-217ENST00000485985 HSD17B14Q9BPX1 270 aa23.28■■□□□ 1.32
LMBR1-217ENST00000485985 MRPL9Q9BYD2 267 aaKnown RBP23.28■■□□□ 1.32
LMBR1-217ENST00000485985 TMEM60Q9H2L4 133 aa23.28■■□□□ 1.32
LMBR1-217ENST00000485985 LIMCH1Q9UPQ0 1083 aa23.28■■□□□ 1.32
LMBR1-217ENST00000485985 POTEMA6NI47 508 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 GAS2O43903 313 aaKnown RBP23.27■■□□□ 1.32
LMBR1-217ENST00000485985 CENPBP07199 599 aaPredicted RBP23.27■■□□□ 1.32
LMBR1-217ENST00000485985 SRGAP2CP0DJJ0 459 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 SMC1AQ14683 1233 aaKnown RBP23.27■■□□□ 1.32
LMBR1-217ENST00000485985 C8orf34Q49A92 452 aa23.27■■□□□ 1.32
LMBR1-217ENST00000485985 OTUD6AQ7L8S5 288 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms