RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 GPR32O75388 356 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 HOXB8P17481 243 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-213ENST00000484112 CLCN3P51790 818 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 NLRP11P59045 1033 aaKnown RBP11.19□□□□□ -0.62
CPSF4-213ENST00000484112 DSC3Q14574 896 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 EARS2Q5JPH6 523 aaKnown RBP11.19□□□□□ -0.62
CPSF4-213ENST00000484112 CES5AQ6NT32 575 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 TMEM87AQ8NBN3 555 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 POMKQ9H5K3 350 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 NRBP2Q9NSY0 501 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 PPME1Q9Y570 386 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 HCFC2Q9Y5Z7 792 aa11.19□□□□□ -0.62
CPSF4-213ENST00000484112 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-213ENST00000484112 C2CD4DB7Z1M9 353 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 NT5C1B-RDH14C9J2C7 533 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 LAD1O00515 517 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-213ENST00000484112 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
CPSF4-213ENST00000484112 BRD1O95696 1058 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 PPM1AP35813 382 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 GUCY1B3Q02153 619 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 SMC1AQ14683 1233 aaKnown RBP11.18□□□□□ -0.62
CPSF4-213ENST00000484112 CALCRLQ16602 461 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 RILPL1Q5EBL4 403 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
CPSF4-213ENST00000484112 EFCAB12Q6NXP0 572 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 MIER3Q7Z3K6 550 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 EXOC8Q8IYI6 725 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 LRRC71Q8N4P6 559 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-213ENST00000484112 HAS1Q92839 578 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 SCLT1Q96NL6 688 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 MTMR9Q96QG7 549 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 UNC45AQ9H3U1 944 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 RNF19AQ9NV58 838 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 GABBR1Q9UBS5 961 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 PCDHA12Q9UN75 941 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 SORCS3Q9UPU3 1222 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 KMT2EQ8IZD2 1858 aa11.18□□□□□ -0.62
CPSF4-213ENST00000484112 C2orf71A6NGG8 1288 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 MAGEB2O15479 319 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 CXCL14O95715 111 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 OATP04181 439 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 P4HBP07237 508 aaKnown RBP11.17□□□□□ -0.62
CPSF4-213ENST00000484112 ASGR2P07307 311 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 FGFR4P22455 802 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 TMOD1P28289 359 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 PSMC5P62195 406 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 ITIH3Q06033 890 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
CPSF4-213ENST00000484112 EPHA7Q15375 998 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 CLLU1OSQ5K130 101 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
CPSF4-213ENST00000484112 KANK3Q6NY19 840 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 HSCBQ8IWL3 235 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 UBALD2Q8IYN6 164 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 SLC39A11Q8N1S5 342 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 MRPL43Q8N983 215 aaKnown RBP11.17□□□□□ -0.62
CPSF4-213ENST00000484112 HELQQ8TDG4 1101 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 NECTIN4Q96NY8 510 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 NIFKQ9BYG3 293 aaKnown RBP11.17□□□□□ -0.62
CPSF4-213ENST00000484112 MFSD1Q9H3U5 465 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 DBR1Q9UK59 544 aaKnown RBP11.17□□□□□ -0.62
CPSF4-213ENST00000484112 C5orf42Q9H799 3197 aa11.17□□□□□ -0.62
CPSF4-213ENST00000484112 FAM205CA6NFA0 338 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 CHMP2AO43633 222 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 DTNBO60941 627 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 EIF4BP23588 611 aaKnown RBP11.16□□□□□ -0.62
CPSF4-213ENST00000484112 MTHFRP42898 656 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 QARSP47897 775 aaKnown RBP11.16□□□□□ -0.62
CPSF4-213ENST00000484112 ALDH7A1P49419 539 aaKnown RBP11.16□□□□□ -0.62
CPSF4-213ENST00000484112 NUBP1P53384 320 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 FOSBP53539 338 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 CDC42EP1Q00587 391 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 LONRF3Q496Y0 759 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 XKR3Q5GH77 459 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 TTC38Q5R3I4 469 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 ATAT1Q5SQI0 421 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 BRAPQ7Z569 592 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 TDRD5Q8NAT2 981 aaKnown RBP11.16□□□□□ -0.62
CPSF4-213ENST00000484112 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 AUTS2Q8WXX7 1259 aa11.16□□□□□ -0.62
CPSF4-213ENST00000484112 JPH2Q9BR39 696 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-213ENST00000484112 ADAMTS10Q9H324 1103 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms