RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FAM167AQ96KS9 214 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 MRPL9Q9BYD2 267 aaKnown RBP14.54□□□□□ -0.08
UBR4-213ENST00000483922 MFSD1Q9H3U5 465 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 DUSP12Q9UNI6 340 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 CHMP2AO43633 222 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 EFEMP2O95967 443 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 NTRK3Q16288 839 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 ERMP1Q7Z2K6 904 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 SIX5Q8N196 739 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 REXO1Q8N1G1 1221 aaKnown RBP14.53□□□□□ -0.08
UBR4-213ENST00000483922 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
UBR4-213ENST00000483922 FAM105AQ9NUU6 356 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 DACT1Q9NYF0 836 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 INPP5FQ9Y2H2 1132 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 EP300Q09472 2414 aaPredicted RBP14.53□□□□□ -0.08
UBR4-213ENST00000483922 C2orf16Q68DN1 1984 aa14.53□□□□□ -0.08
UBR4-213ENST00000483922 PRPF3O43395 683 aaKnown RBP14.52□□□□□ -0.09
UBR4-213ENST00000483922 PSMD10O75832 226 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 SSBP05455 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
UBR4-213ENST00000483922 MYBP10242 640 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 IRX6P78412 446 aaPredicted RBP14.52□□□□□ -0.09
UBR4-213ENST00000483922 TBC1D8BQ0IIM8 1120 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 GIT2Q14161 759 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 MTERF2Q49AM1 385 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 UBXN11Q5T124 520 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 PHKBQ93100 1093 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 CCDC136Q96JN2 1154 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 YTHDC1Q96MU7 727 aaKnown RBP14.52□□□□□ -0.09
UBR4-213ENST00000483922 GCOM2Q9BZD3 368 aaPredicted RBP14.52□□□□□ -0.09
UBR4-213ENST00000483922 GBP3Q9H0R5 595 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 MINDY3Q9H8M7 445 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 IFT122Q9HBG6 1241 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 C6orf50Q9HD87 102 aa14.52□□□□□ -0.09
UBR4-213ENST00000483922 MAFO75444 373 aaPredicted RBP14.51□□□□□ -0.09
UBR4-213ENST00000483922 KLRC2P26717 231 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 HOXA11P31270 313 aaPredicted RBP14.51□□□□□ -0.09
UBR4-213ENST00000483922 LETM2Q2VYF4 491 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 TWF2Q6IBS0 349 aaKnown RBP14.51□□□□□ -0.09
UBR4-213ENST00000483922 CCDC149Q6ZUS6 474 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 ANO5Q75V66 913 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 OTOP3Q7RTS5 596 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 MRPL10Q7Z7H8 261 aaKnown RBP14.51□□□□□ -0.09
UBR4-213ENST00000483922 SLC44A3Q8N4M1 653 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 RMDN1Q96DB5 314 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 MYADMQ96S97 322 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 RIT2Q99578 217 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 SFXN1Q9H9B4 322 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 SUCLA2Q9P2R7 463 aaPredicted RBP14.51□□□□□ -0.09
UBR4-213ENST00000483922 PIN4Q9Y237 131 aaKnown RBP14.51□□□□□ -0.09
UBR4-213ENST00000483922 PCDHB2Q9Y5E7 798 aa14.51□□□□□ -0.09
UBR4-213ENST00000483922 MED19A0JLT2 244 aaPredicted RBP14.5□□□□□ -0.09
UBR4-213ENST00000483922 F8W810 466 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 NRP1O14786 923 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 CFHP08603 1231 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 LRCH2Q5VUJ6 765 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 GLB1LQ6UWU2 654 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 C15orf39Q6ZRI6 1047 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 Q6ZUG5 572 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 PPFIBP1Q86W92 1011 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 RHPN2Q8IUC4 686 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
UBR4-213ENST00000483922 ZNF707Q96C28 371 aaPredicted RBP14.5□□□□□ -0.09
UBR4-213ENST00000483922 ACSF2Q96CM8 615 aaPredicted RBP14.5□□□□□ -0.09
UBR4-213ENST00000483922 SCLT1Q96NL6 688 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 MIOSQ9NXC5 875 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 DLGAP2Q9P1A6 1054 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 VPS54Q9P1Q0 977 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 SEPT9Q9UHD8 586 aaPredicted RBP14.5□□□□□ -0.09
UBR4-213ENST00000483922 R4GN57 208 aa14.5□□□□□ -0.09
UBR4-213ENST00000483922 CCDC195A0A1B0GUA6 201 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 GAS7O60861 476 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 RFPL2O75678 378 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 TDP2O95551 362 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 POMCP01189 267 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 SFNP31947 248 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 USP11P51784 963 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 RCAN1P53805 252 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 RNASELQ05823 741 aaKnown RBP14.49□□□□□ -0.09
UBR4-213ENST00000483922 BMS1Q14692 1282 aaKnown RBP14.49□□□□□ -0.09
UBR4-213ENST00000483922 XKR3Q5GH77 459 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 KIAA0319Q5VV43 1072 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 PLA2G4FQ68DD2 849 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
UBR4-213ENST00000483922 CMASQ8NFW8 434 aaPredicted RBP14.49□□□□□ -0.09
UBR4-213ENST00000483922 RTP3Q9BQQ7 232 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 WRAP73Q9P2S5 460 aaPredicted RBP14.49□□□□□ -0.09
UBR4-213ENST00000483922 WNT16Q9UBV4 365 aa14.49□□□□□ -0.09
UBR4-213ENST00000483922 NID2Q14112 1375 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 ZFHX4Q86UP3 3567 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 M0R2N6 131 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 EML1O00423 815 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 C2CD2LO14523 706 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 TEX28O15482 410 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 PAPLNO95428 1278 aa14.48□□□□□ -0.09
UBR4-213ENST00000483922 ALDH2P05091 517 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms