RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 SPTBN4Q9H254 2564 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 FAM186AA6NE01 2351 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 ADAMTS3O15072 1205 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 ASGR2P07307 311 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 CYP3A4P08684 503 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 EIF4BP23588 611 aaKnown RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 MTHFRP42898 656 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 ALDH7A1P49419 539 aaKnown RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 GPC3P51654 580 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 ITIH3Q06033 890 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 TBC1D8BQ0IIM8 1120 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 KCNC3Q14003 757 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 SLC39A11Q8N1S5 342 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 C12orf76Q8N812 135 aaPredicted RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 AUTS2Q8WXX7 1259 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 GBP3Q9H0R5 595 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 ADAM7Q9H2U9 754 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 ADAMTS10Q9H324 1103 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 SMOC2Q9H3U7 446 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 NRBP2Q9NSY0 501 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 DACT1Q9NYF0 836 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 DBR1Q9UK59 544 aaKnown RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 INPP5FQ9Y2H2 1132 aa11.63□□□□□ -0.55
DDX39B-220ENST00000482195 RIF1Q5UIP0 2472 aaKnown RBP11.63□□□□□ -0.55
DDX39B-220ENST00000482195 CCDC196A0A1B0GTZ2 297 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 GAS7O60861 476 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
DDX39B-220ENST00000482195 BRD1O95696 1058 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 CXCL14O95715 111 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 DARSP14868 501 aaKnown RBP11.62□□□□□ -0.55
DDX39B-220ENST00000482195 GNA11P29992 359 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 ADD1P35611 737 aaKnown RBP11.62□□□□□ -0.55
DDX39B-220ENST00000482195 BCAR1P56945 870 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 EXOSC10Q01780 885 aaKnown RBP11.62□□□□□ -0.55
DDX39B-220ENST00000482195 KRT32Q14532 448 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 UGCGQ16739 394 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 ADCK5Q3MIX3 580 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 MTERF2Q49AM1 385 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 MCTP2Q6DN12 878 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
DDX39B-220ENST00000482195 UBALD2Q8IYN6 164 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 VPS52Q8N1B4 723 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 CCDC148Q8NFR7 591 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 ZMYND12Q9H0C1 365 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 DISC1Q9NRI5 854 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 DZANK1Q9NVP4 752 aa11.62□□□□□ -0.55
DDX39B-220ENST00000482195 A0A0U1RQF3 1178 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 ZNF862O60290 1169 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 CPA1P15085 419 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 EPCAMP16422 314 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 SFPQP23246 707 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDX39B-220ENST00000482195 JAK3P52333 1124 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 RNASELQ05823 741 aaKnown RBP11.61□□□□□ -0.55
DDX39B-220ENST00000482195 LRCH2Q5VUJ6 765 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 Q6ZUG5 572 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 CABP7Q86V35 215 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 LINC01465Q8N7H1 131 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 MRPL43Q8N983 215 aaKnown RBP11.61□□□□□ -0.55
DDX39B-220ENST00000482195 BICD2Q8TD16 824 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 CRYGNQ8WXF5 182 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 LPPQ93052 612 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 PHKBQ93100 1093 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 GCOM2Q9BZD3 368 aaPredicted RBP11.61□□□□□ -0.55
DDX39B-220ENST00000482195 ZBP1Q9H171 429 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 UNC45AQ9H3U1 944 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 PIN4Q9Y237 131 aaKnown RBP11.61□□□□□ -0.55
DDX39B-220ENST00000482195 DMDP11532 3685 aa11.61□□□□□ -0.55
DDX39B-220ENST00000482195 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
DDX39B-220ENST00000482195 MSH4O15457 936 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 EOMESO95936 686 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 SSBP05455 408 aaKnown RBP eCLIP11.6□□□□□ -0.555e-9■■■■■ 31.2
DDX39B-220ENST00000482195 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
DDX39B-220ENST00000482195 RCAN1P53805 252 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 ATAT1Q5SQI0 421 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 KIAA1841Q6NSI8 718 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 KANK3Q6NY19 840 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 MIER3Q7Z3K6 550 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 ZNF598Q86UK7 904 aaKnown RBP11.6□□□□□ -0.55
DDX39B-220ENST00000482195 SKAP1Q86WV1 359 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 TMEM173Q86WV6 379 aaPredicted RBP11.6□□□□□ -0.55
DDX39B-220ENST00000482195 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 TMEM105Q8N8V8 129 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 FLCNQ8NFG4 579 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 BRF1Q92994 677 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 GJA10Q969M2 543 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 SH2D3AQ9BRG2 576 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 SLC26A6Q9BXS9 759 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 VPS54Q9P1Q0 977 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 LIMD1Q9UGP4 676 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
DDX39B-220ENST00000482195 A0A087WZ62 844 aa11.59□□□□□ -0.55
DDX39B-220ENST00000482195 TMEM150BA6NC51 233 aa11.59□□□□□ -0.55
DDX39B-220ENST00000482195 SFNP31947 248 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms