RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 RBM19Q9Y4C8 960 aaKnown RBP12.97□□□□□ -0.33
GARNL3-217ENST00000481875 RIF1Q5UIP0 2472 aaKnown RBP12.97□□□□□ -0.33
GARNL3-217ENST00000481875 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 C2orf71A6NGG8 1288 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 HIDE1A8MVS5 230 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 PHKA2P46019 1235 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 MRE11P49959 708 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 NLRP5P59047 1200 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 GIT2Q14161 759 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 BMS1Q14692 1282 aaKnown RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 TPRNQ4KMQ1 711 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 MIER3Q7Z3K6 550 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 ALYREFQ86V81 257 aaKnown RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 EXOC8Q8IYI6 725 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 BLIDQ8IZY5 108 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 CASP10Q92851 521 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 PBXIP1Q96AQ6 731 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 ASIC4Q96FT7 647 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 PPP1R16BQ96T49 567 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 JPH2Q9BR39 696 aaPredicted RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 ADAM7Q9H2U9 754 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 STK39Q9UEW8 545 aa12.96□□□□□ -0.33
GARNL3-217ENST00000481875 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
GARNL3-217ENST00000481875 DTNBO60941 627 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 CSPG5O95196 566 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 SFPQP23246 707 aaKnown RBP eCLIP12.95□□□□□ -0.34
GARNL3-217ENST00000481875 TECP42680 631 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 RAB27AP51159 221 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 PPP2R5CQ13362 524 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 DRP2Q13474 957 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 PTPN21Q16825 1174 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 ANO5Q75V66 913 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
GARNL3-217ENST00000481875 TMC7Q7Z402 723 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 FBXL6Q8N531 539 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
GARNL3-217ENST00000481875 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 ENTPD7Q9NQZ7 604 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-217ENST00000481875 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-217ENST00000481875 SMC3Q9UQE7 1217 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 HCFC2Q9Y5Z7 792 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
GARNL3-217ENST00000481875 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-217ENST00000481875 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-217ENST00000481875 VPS13AQ96RL7 3174 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 TBX3O15119 743 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 JAK2O60674 1132 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 PTPN5P54829 565 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 BCAR1P56945 870 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 PSMC5P62195 406 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 CUL4AQ13619 759 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 PCBP1Q15365 356 aaKnown RBP eCLIP12.94□□□□□ -0.34
GARNL3-217ENST00000481875 PLPP4Q5VZY2 271 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 DDX53Q86TM3 631 aaKnown RBP12.94□□□□□ -0.34
GARNL3-217ENST00000481875 FAM184AQ8NB25 1140 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 NLRP7Q8WX94 980 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 WASF1Q92558 559 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 RPGRIP1Q96KN7 1286 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
GARNL3-217ENST00000481875 A0A087WZ62 844 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 DKC1O60832 514 aaKnown RBP eCLIP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 CLASP2O75122 1294 aaKnown RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 TDP2O95551 362 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 CTSAP10619 480 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 NONOQ15233 471 aaKnown RBP eCLIP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 MRPL10Q7Z7H8 261 aaKnown RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 SUGP1Q8IWZ8 645 aaKnown RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 UBALD2Q8IYN6 164 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 TMEM169Q96HH4 297 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 IGSF21Q96ID5 467 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 FDXACB1Q9BRP7 624 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 ZBP1Q9H171 429 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 IRF2BPLQ9H1B7 796 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 DHX33Q9H6R0 707 aaKnown RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 FAM105AQ9NUU6 356 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 DZANK1Q9NVP4 752 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 SEPT9Q9UHD8 586 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-217ENST00000481875 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 USTQ9Y2C2 406 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 DENND4AQ7Z401 1863 aa12.93□□□□□ -0.34
GARNL3-217ENST00000481875 FAM186AA6NE01 2351 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms