RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRA2B-212ENST00000480461 REEP2Q9BRK0 252 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-212ENST00000480461 POLR3FQ9H1D9 316 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-212ENST00000480461 MINDY3Q9H8M7 445 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-212ENST00000480461 KAT6AQ92794 2004 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 EVPLQ92817 2033 aa13.56□□□□□ -0.24
TRA2B-212ENST00000480461 PRRC2BQ5JSZ5 2229 aaKnown RBP13.55□□□□□ -0.24
TRA2B-212ENST00000480461 CAND2O75155 1236 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 NR1I2O75469 434 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 SLFN14P0C7P3 912 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 SYKP43405 635 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 CRYBB1P53674 252 aaPredicted RBP13.55□□□□□ -0.24
TRA2B-212ENST00000480461 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
TRA2B-212ENST00000480461 CAPSQ13938 189 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 MCPH1Q8NEM0 835 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 PSPC1Q8WXF1 523 aaKnown RBP13.55□□□□□ -0.24
TRA2B-212ENST00000480461 DDX12PQ92771 950 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 OSMRQ99650 979 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 JPH2Q9BR39 696 aaPredicted RBP13.55□□□□□ -0.24
TRA2B-212ENST00000480461 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
TRA2B-212ENST00000480461 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 MTCH2Q9Y6C9 303 aa13.55□□□□□ -0.24
TRA2B-212ENST00000480461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
TRA2B-212ENST00000480461 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
TRA2B-212ENST00000480461 GPR37L1O60883 481 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 CXCL10P02778 98 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 GHRP10912 638 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
TRA2B-212ENST00000480461 FGFR4P22455 802 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 AFMP43652 599 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 RSPH3Q86UC2 560 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 CCDC155Q8N6L0 562 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 TCP11Q8WWU5 503 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 NLRP4Q96MN2 994 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 CCDC43Q96MW1 224 aaKnown RBP13.54□□□□□ -0.24
TRA2B-212ENST00000480461 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 MAP7D2Q96T17 732 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 NTPCRQ9BSD7 190 aaKnown RBP13.54□□□□□ -0.24
TRA2B-212ENST00000480461 BLZF1Q9H2G9 400 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 ADGRA3Q8IWK6 1321 aa13.54□□□□□ -0.24
TRA2B-212ENST00000480461 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 GOLGA6L4A6NEF3 574 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 EPOPA6NHQ4 379 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 ASAP2O43150 1006 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 TLL1O43897 1013 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
TRA2B-212ENST00000480461 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
TRA2B-212ENST00000480461 CD52P31358 61 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 NPTX2P47972 431 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 ZNF131P52739 623 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 PTENP60484 403 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 UBE2HP62256 183 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 FAM160A1Q05DH4 1040 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 CUL4BQ13620 913 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
TRA2B-212ENST00000480461 PLEKHG4Q58EX7 1191 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 RTN4RL1Q86UN2 441 aaPredicted RBP13.53□□□□□ -0.24
TRA2B-212ENST00000480461 ALYREFQ86V81 257 aaKnown RBP13.53□□□□□ -0.24
TRA2B-212ENST00000480461 RNF149Q8NC42 400 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 DBF4BQ8NFT6 615 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 KIFAP3Q92845 792 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 KIFC3Q9BVG8 833 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 TRIM9Q9C026 710 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 CUEDC2Q9H467 287 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 KCND2Q9NZV8 630 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 PADI3Q9ULW8 664 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 COG5Q9UP83 839 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 USP20Q9Y2K6 914 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 SLC4A7Q9Y6M7 1214 aa13.53□□□□□ -0.24
TRA2B-212ENST00000480461 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 RFXAPO00287 272 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
TRA2B-212ENST00000480461 EDN1P05305 212 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 CA3P07451 260 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 ATP2A2P16615 1042 aaKnown RBP13.52□□□□□ -0.25
TRA2B-212ENST00000480461 PEX3P56589 373 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 POU5F1BQ06416 359 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 CNNM4Q6P4Q7 775 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 TAS1R3Q7RTX0 852 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 FAM228AQ86W67 206 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
TRA2B-212ENST00000480461 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
TRA2B-212ENST00000480461 HPS3Q969F9 1004 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms