RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 MAP4K3Q8IVH8 894 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 NOC4LQ9BVI4 516 aaKnown RBP12.3□□□□□ -0.44
APTX-223ENST00000479656 UPF3AQ9H1J1 476 aaKnown RBP12.3□□□□□ -0.44
APTX-223ENST00000479656 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 EXOC7Q9UPT5 735 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 USP20Q9Y2K6 914 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 CASP8AP2Q9UKL3 1982 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 RRN3P2A6NIE6 340 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 H0YCG3 227 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 AKAP3O75969 853 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 GNA14O95837 355 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 MYCNP04198 464 aaPredicted RBP12.29□□□□□ -0.44
APTX-223ENST00000479656 CYP2J2P51589 502 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 PRMT2P55345 433 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 NFIL3Q16649 462 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 RNF149Q8NC42 400 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 DMAC2Q9NW81 257 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 NRCAMQ92823 1304 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 ASAP2O43150 1006 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 KPNA6O60684 536 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 ADAMTS4O75173 837 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 TPM2P07951 284 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 TMOD1P28289 359 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 UBXN1Q04323 297 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 HIC1Q14526 733 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 MIIPQ5JXC2 388 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 LINC01465Q8N7H1 131 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 TRIM44Q96DX7 344 aaPredicted RBP12.29□□□□□ -0.44
APTX-223ENST00000479656 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 CBWD1Q9BRT8 395 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 KATNAL1Q9BW62 490 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 TMEM134Q9H6X4 195 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 AKT3Q9Y243 479 aa12.29□□□□□ -0.44
APTX-223ENST00000479656 GOLGA6L6A8MZA4 724 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 VTNP04004 478 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 INHAP05111 366 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 ADSSP30520 456 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 GRK4P32298 578 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 ABCD1P33897 745 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 PSMC2P35998 433 aaKnown RBP12.28□□□□□ -0.44
APTX-223ENST00000479656 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
APTX-223ENST00000479656 NKX3-2P78367 333 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 STRN3Q13033 797 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 MAN2A1Q16706 1144 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 ARMCX5Q6P1M9 558 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 SLC39A4Q6P5W5 647 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 SLC9A9Q8IVB4 645 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 BICD1Q96G01 975 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 PPP1R16BQ96T49 567 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 MTG1Q9BT17 334 aaPredicted RBP12.28□□□□□ -0.44
APTX-223ENST00000479656 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 CGNQ9P2M7 1197 aaKnown RBP12.28□□□□□ -0.44
APTX-223ENST00000479656 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
APTX-223ENST00000479656 DDX20Q9UHI6 824 aaKnown RBP12.28□□□□□ -0.44
APTX-223ENST00000479656 LGALS16A8MUM7 142 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 ZEB2O60315 1214 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 EXOC3O60645 756 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.44
APTX-223ENST00000479656 PBX1P40424 430 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 SNRPFP62306 86 aaKnown RBP12.27□□□□□ -0.44
APTX-223ENST00000479656 ZNF200P98182 395 aaPredicted RBP12.27□□□□□ -0.44
APTX-223ENST00000479656 TFDP1Q14186 410 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 MYBPC2Q14324 1141 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 KCNA10Q16322 511 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 FRMD5Q7Z6J6 570 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 TRIM59Q8IWR1 403 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 KIAA0319LQ8IZA0 1049 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 KLHDC9Q8NEP7 349 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 KCNN1Q92952 543 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 ZNF830Q96NB3 372 aaPredicted RBP12.27□□□□□ -0.44
APTX-223ENST00000479656 ARMCX3Q9UH62 379 aaPredicted RBP12.27□□□□□ -0.44
APTX-223ENST00000479656 FRMD4BQ9Y2L6 1034 aa12.27□□□□□ -0.44
APTX-223ENST00000479656 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
APTX-223ENST00000479656 SLC16A3O15427 465 aaKnown RBP12.27□□□□□ -0.45
APTX-223ENST00000479656 TREHO43280 583 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 EDN1P05305 212 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 ASGR1P07306 291 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 SCP2P22307 547 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 LIG4P49917 911 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 EFNA5P52803 228 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 ADAM17P78536 824 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 ARID5BQ14865 1188 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
APTX-223ENST00000479656 SPECC1LQ69YQ0 1117 aa12.27□□□□□ -0.45
APTX-223ENST00000479656 ZBTB8OSQ8IWT0 167 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms