RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 TRAIPQ9BWF2 469 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 EIF2AQ9BY44 585 aaKnown RBP11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 BACH2Q9BYV9 841 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 TMEM117Q9H0C3 514 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 CXCL16Q9H2A7 254 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 AGPAT5Q9NUQ2 364 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 COG5Q9UP83 839 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 HES2Q9Y543 173 aa11.4□□□□□ -0.59
LCLAT1-209ENST00000478015 ST18O60284 1047 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 TSPAN1O60635 241 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 PTENP60484 403 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 MBTD1Q05BQ5 628 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 CLUL1Q15846 466 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 PTPROQ16827 1216 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 TWF2Q6IBS0 349 aaKnown RBP11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 OTUD6AQ7L8S5 288 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 ZNF280BQ86YH2 543 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 IGSF22Q8N9C0 903 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 SMG8Q8ND04 991 aaKnown RBP11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 LRRC15Q8TF66 581 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 IGFLR1Q9H665 355 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 ANKEF1Q9NU02 776 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 DNAJB4Q9UDY4 337 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 PCDHB2Q9Y5E7 798 aa11.39□□□□□ -0.59
LCLAT1-209ENST00000478015 HIDE1A8MVS5 230 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 OFD1O75665 1012 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 RPA1P27694 616 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 KCNT2Q6UVM3 1135 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 PABPC5Q96DU9 382 aaKnown RBP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 POLR3CQ9BUI4 534 aaPredicted RBP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 VN1R3Q9BXE9 311 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 CLDND1Q9NY35 253 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 CLEC1BQ9P126 229 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 TRIP11Q15643 1979 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 F8W810 466 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 ZNF623O75123 536 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 DGAT1O75907 488 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 DDHD2O94830 711 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 EOMESO95936 686 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 ARF4P18085 180 aaPredicted RBP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 GRIN1Q05586 938 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 LEXMQ3ZCV2 418 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 TIGD5Q53EQ6 642 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 ODR4Q5SWX8 454 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 SPOUT1Q5T280 376 aaKnown RBP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 MCTP1Q6DN14 999 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 EP400NLQ6ZTU2 488 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 KIFC3Q9BVG8 833 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 POLR3FQ9H1D9 316 aaPredicted RBP11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 TBC1D13Q9NVG8 400 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 MIOSQ9NXC5 875 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 CDH22Q9UJ99 828 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
LCLAT1-209ENST00000478015 E9PMD0 336 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 DKC1O60832 514 aaKnown RBP eCLIP11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 NRIP1P48552 1158 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 CDC42EP1Q00587 391 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 ADAM15Q13444 863 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 GSTCDQ8NEC7 633 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 SYMPKQ92797 1274 aaKnown RBP11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 NRDE2Q9H7Z3 1164 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 TUFT1Q9NNX1 390 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 DACT1Q9NYF0 836 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 KIAA1024Q9UPX6 916 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 INPP5FQ9Y2H2 1132 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 WDR87Q6ZQQ6 2873 aa11.37□□□□□ -0.59
LCLAT1-209ENST00000478015 GRXCR2A6NFK2 248 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 FSCN2O14926 492 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 BCAR1P56945 870 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 CUL4AQ13619 759 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 GNL2Q13823 731 aaKnown RBP11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 KCNC3Q14003 757 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 NAALADL2Q58DX5 795 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 PTCRAQ6ISU1 281 aaPredicted RBP11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 MRPL10Q7Z7H8 261 aaKnown RBP11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 THNSL1Q8IYQ7 743 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 DAW1Q8N136 415 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 AUTS2Q8WXX7 1259 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 BHMT2Q9H2M3 363 aa11.36□□□□□ -0.59
LCLAT1-209ENST00000478015 CACNG4Q9UBN1 327 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms