RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TTC23LQ6PF05 361 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 Q6ZNX1 250 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 SPATA31D4Q6ZUB0 917 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 DHX32Q7L7V1 743 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 PATL1Q86TB9 770 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 SPATA24Q86W54 205 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 LSRQ86X29 649 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 TREML1Q86YW5 311 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 NUTM2AQ8IVF1 878 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 BRSK2Q8IWQ3 736 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.46□□□□□ -1.7
CD55-208ENST00000476590 LSMEM1Q8N8F7 131 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 CCDC197Q8NCU1 140 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 OR7G1Q8NGA0 311 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 FAM174AQ8TBP5 190 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 BRSK1Q8TDC3 778 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 GTF3C2Q8WUA4 911 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 PEX13Q92968 403 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 EFHD2Q96C19 240 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 EGLN2Q96KS0 407 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 IFT74Q96LB3 600 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PANX2Q96RD6 677 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 HEPHQ9BQS7 1158 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 NUF2Q9BZD4 464 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 C12orf10Q9HB07 376 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PPANQ9NQ55 473 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 CCDC177Q9NQR7 707 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 SNTG2Q9NY99 539 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PTTG2Q9NZH5 202 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 DSEQ9UL01 958 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PLAAQ9Y263 795 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 HBS1LQ9Y450 684 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 MYO5CQ9NQX4 1742 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 ANKRD34BA5PLL1 514 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 CCDC169A6NNP5 214 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 GNAT3A8MTJ3 354 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 USP17L5A8MUK1 530 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TMEM114B3SHH9 223 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 HIP1O00291 1037 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 PIP5K1CO60331 668 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TMCC2O75069 709 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TSPAN9O75954 239 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TJP3O95049 919 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 VAV1P15498 845 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 ATF3P18847 181 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 MZF1P28698 734 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 SKIV2L2P42285 1042 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 MSH2P43246 934 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 MAPK8P45983 427 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 CENPAP49450 140 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 GALK1P51570 392 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 ARFIP2P53365 341 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 RAD23BP54727 409 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 KRT83P78385 493 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 KIF23Q02241 960 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 CKAP4Q07065 602 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 MRPL28Q13084 256 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 ITGA9Q13797 1035 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 R3HDM1Q15032 1099 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 CYTH1Q15438 398 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 INSCQ1MX18 579 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 RSPO4Q2I0M5 234 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 CEP78Q5JTW2 689 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 ZNF569Q5MCW4 686 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 LMBRD2Q68DH5 695 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 OTUD7BQ6GQQ9 843 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 LRRC8BQ6P9F7 803 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 EMBQ6PCB8 327 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 BEND5Q7L4P6 421 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 MAEAQ7L5Y9 396 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 VASH1Q7L8A9 365 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 PPP1R42Q7Z4L9 355 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 SNX32Q86XE0 403 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 CCNJLQ8IV13 435 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 CROCCP3Q8IVE0 287 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 CD302Q8IX05 232 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 SCUBE3Q8IX30 993 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 RBBP8NLQ8NC74 664 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 DDHD1Q8NEL9 900 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 NOC3LQ8WTT2 800 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 NAT14Q8WUY8 206 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 OSCP1Q8WVF1 389 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 SCG3Q8WXD2 468 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 NELL1Q92832 810 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TTC1Q99614 292 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 AIFM2Q9BRQ8 373 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TAF1DQ9H5J8 278 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 PSTPIP2Q9H939 334 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 SRA1Q9HD15 236 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 NEUROD4Q9HD90 331 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 VTA1Q9NP79 307 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 MOCS1Q9NZB8 636 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 EGFL7Q9UHF1 273 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 POLG2Q9UHN1 485 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 EVLQ9UI08 416 aaPredicted RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 HERC5Q9UII4 1024 aaKnown RBP4.45□□□□□ -1.7
CD55-208ENST00000476590 TRIM17Q9Y577 477 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 TLL2Q9Y6L7 1015 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 MED14O60244 1454 aa4.45□□□□□ -1.7
CD55-208ENST00000476590 PNPLA6Q8IY17 1366 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms