RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 MARCKSP29966 332 aaPredicted RBP15.16■□□□□ 0.02
RAB5A-208ENST00000476544 LONRF3Q496Y0 759 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 SPECC1Q5M775 1068 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 RINT1Q6NUQ1 792 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 AGMOQ6ZNB7 445 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 LPPQ93052 612 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 EPSTI1Q96J88 318 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 CLIC6Q96NY7 704 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 FZD8Q9H461 694 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
RAB5A-208ENST00000476544 LRFN2Q9ULH4 789 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 PLAGL2Q9UPG8 496 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 ZDHHC9Q9Y397 364 aa15.16■□□□□ 0.02
RAB5A-208ENST00000476544 TBKBP1A7MCY6 615 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SFI1A8K8P3 1242 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 OFD1O75665 1012 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 RB1P06400 928 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SFPQP23246 707 aaKnown RBP eCLIP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 GPM6BQ13491 265 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 CDCA2Q69YH5 1023 aaPredicted RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 HSCBQ8IWL3 235 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SYT2Q8N9I0 419 aaPredicted RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SMG8Q8ND04 991 aaKnown RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 MCPH1Q8NEM0 835 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SPPL3Q8TCT6 385 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 CPB2Q96IY4 423 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SAMD11Q96NU1 681 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 EIF2AQ9BY44 585 aaKnown RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 RAB34Q9BZG1 259 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 CSRNP2Q9H175 543 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 FAM105AQ9NUU6 356 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 LMCD1Q9NZU5 365 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 PCDHB2Q9Y5E7 798 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 SRPRBQ9Y5M8 271 aaKnown RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 STK24Q9Y6E0 443 aa15.15■□□□□ 0.02
RAB5A-208ENST00000476544 MYH9P35579 1960 aaKnown RBP15.15■□□□□ 0.02
RAB5A-208ENST00000476544 B4GALT3O60512 393 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 ARF4P18085 180 aaPredicted RBP15.14■□□□□ 0.01
RAB5A-208ENST00000476544 ZRSR1Q15695 479 aaKnown RBP15.14■□□□□ 0.01
RAB5A-208ENST00000476544 CABP7Q86V35 215 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
RAB5A-208ENST00000476544 TMEM117Q9H0C3 514 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 ZSCAN16Q9H4T2 348 aaPredicted RBP15.14■□□□□ 0.01
RAB5A-208ENST00000476544 ALG13Q9NP73 1137 aaKnown RBP15.14■□□□□ 0.01
RAB5A-208ENST00000476544 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 UNC80Q8N2C7 3258 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
RAB5A-208ENST00000476544 NPHP3-ACAD11A0A0J9YXS1 232 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 A0A1B0GUA9 196 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 INO80B-WBP1J3KQ70 363 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 BMP15O95972 392 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 ITGB1P05556 798 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 LONP1P36776 959 aaKnown RBP15.13■□□□□ 0.01
RAB5A-208ENST00000476544 NASPP49321 788 aaPredicted RBP15.13■□□□□ 0.01
RAB5A-208ENST00000476544 TFDP1Q14186 410 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 NT5DC1Q5TFE4 455 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 TWF2Q6IBS0 349 aaKnown RBP15.13■□□□□ 0.01
RAB5A-208ENST00000476544 TAS1R3Q7RTX0 852 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 KLHL23Q8NBE8 558 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 RNF169Q8NCN4 708 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 LINC00301Q8NCQ3 95 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 SLC17A8Q8NDX2 589 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 HELQQ8TDG4 1101 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 AK8Q96MA6 479 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 NTPCRQ9BSD7 190 aaKnown RBP15.13■□□□□ 0.01
RAB5A-208ENST00000476544 KIFC3Q9BVG8 833 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 CCSER1Q9C0I3 900 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 MIOSQ9NXC5 875 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 MORC2Q9Y6X9 1032 aaPredicted RBP15.13■□□□□ 0.01
RAB5A-208ENST00000476544 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
RAB5A-208ENST00000476544 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 PRRC2BQ5JSZ5 2229 aaKnown RBP15.12■□□□□ 0.01
RAB5A-208ENST00000476544 HIP1RO75146 1068 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 PLA2G4BP0C869 781 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 ZSCAN22P10073 491 aaPredicted RBP15.12■□□□□ 0.01
RAB5A-208ENST00000476544 CTNNB1P35222 781 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
RAB5A-208ENST00000476544 FAM187BQ17R55 369 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 MRPL38Q96DV4 380 aaKnown RBP15.12■□□□□ 0.01
RAB5A-208ENST00000476544 CHAMP1Q96JM3 812 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 PLVAPQ9BX97 442 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 CXCL16Q9H2A7 254 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 HES2Q9Y543 173 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 GBF1Q92538 1859 aa15.12■□□□□ 0.01
RAB5A-208ENST00000476544 SPTBN5Q9NRC6 3674 aaKnown RBP15.12■□□□□ 0.01
RAB5A-208ENST00000476544 XIRP2A4UGR9 3374 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms