RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 UBA6A0AVT1 1052 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 H0Y3Z8 333 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 DNAJC8O75937 253 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 CDC27P30260 824 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 PAPOLAP51003 745 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 ARL4CP56559 192 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 BEND6Q5SZJ8 279 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 KDM6BO15054 1643 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 SHROOM2Q13796 1616 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 NPHP3-ACAD11A0A0J9YXS1 232 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 IPO5O00410 1097 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 TTLL4Q14679 1199 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 CEP72Q9P209 647 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 GYG2O15488 501 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 DRAP1Q14919 205 aaPredicted RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 COG4Q9H9E3 785 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 CAPN11Q9UMQ6 739 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 SYNGAP1Q96PV0 1343 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 DIAPH2O60879 1101 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 TADA3O75528 432 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 ATICP31939 592 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 EIF3BP55884 814 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 RFX8Q6ZV50 586 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 CCNYL1Q8N7R7 359 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 PPM1NQ8N819 430 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 ZNF564Q8TBZ8 553 aaPredicted RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 NSUN6Q8TEA1 469 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 LXNQ9BS40 222 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 SUN2Q9UH99 717 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 L3MBTL1Q9Y468 752 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 F8W8V4 182 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 DFFAO00273 331 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 IGKV5-2P06315 115 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 QARSP47897 775 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 COPS2P61201 443 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 CEP19Q96LK0 163 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 EIF2AK1Q9BQI3 630 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 TMEM247A6NEH6 219 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 DPYSL4O14531 572 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 KRT37O76014 449 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 ZBTB18Q99592 522 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 CYP27B1O15528 508 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 SKIV2LQ15477 1246 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 RBM41Q96IZ5 413 aaKnown RBP11.68□□□□□ -0.54
VAPB-204ENST00000475243 SP110Q9HB58 689 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 HDAC6Q9UBN7 1215 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
VAPB-204ENST00000475243 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 PDCLQ13371 301 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 TMED1Q13445 227 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 ULK4Q96C45 1275 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 TUBB6Q9BUF5 446 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 DHX35Q9H5Z1 703 aaKnown RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 SCOCQ9UIL1 159 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 ANGPTL2Q9UKU9 493 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 TDP2O95551 362 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 WDR75Q8IWA0 830 aaKnown RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 RAPGEF5Q92565 580 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 MRPL4Q9BYD3 311 aaKnown RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 NDFIP2Q9NV92 336 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 LGALS16A8MUM7 142 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 FCER1AP12319 257 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 MAGOHP61326 146 aaKnown RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 FAM102AQ5T9C2 384 aaPredicted RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 FBXO38Q6PIJ6 1188 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 OR6P1Q8NGX9 317 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 HPS3Q969F9 1004 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 NRBF2Q96F24 287 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 APOBEC2Q9Y235 224 aaKnown RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 TBC1D22BQ9NU19 505 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 MID2Q9UJV3 735 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 SPAG7O75391 227 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 RASSF3Q86WH2 238 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 GIPC2Q8TF65 315 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 TRIM55Q9BYV6 548 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 RPAP3Q9H6T3 665 aaPredicted RBP11.67□□□□□ -0.54
VAPB-204ENST00000475243 DNAJC6O75061 913 aa11.67□□□□□ -0.54
VAPB-204ENST00000475243 CALB1P05937 261 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms