RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 FRMD3A2A2Y4 597 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 SFI1A8K8P3 1242 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 C9IYK1 514 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 POLR2DO15514 142 aaKnown RBP11.53□□□□□ -0.56
VANGL1-205ENST00000474344 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
VANGL1-205ENST00000474344 PFKFB1P16118 471 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 STAT6P42226 847 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 PHKA2P46019 1235 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 NPTX2P47972 431 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 TFDP1Q14186 410 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 PCBP1Q15365 356 aaKnown RBP eCLIP11.53□□□□□ -0.56
VANGL1-205ENST00000474344 FAM187BQ17R55 369 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 HABP4Q5JVS0 413 aaKnown RBP11.53□□□□□ -0.56
VANGL1-205ENST00000474344 ODR4Q5SWX8 454 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 SV2BQ7L1I2 683 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 TAS1R3Q7RTX0 852 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 IQUBQ8NA54 791 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 TMEM87AQ8NBN3 555 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 PHOSPHO2Q8TCD6 241 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 SPIRE2Q8WWL2 714 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 TOP1MTQ969P6 601 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 DRC1Q96MC2 740 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 REEP2Q9BRK0 252 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 TRAIPQ9BWF2 469 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 GOLPH3LQ9H4A5 285 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 ARHGAP28Q9P2N2 729 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 SLC4A7Q9Y6M7 1214 aa11.53□□□□□ -0.56
VANGL1-205ENST00000474344 BRWD1Q9NSI6 2320 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 GRXCR1A8MXD5 290 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 SOX1O00570 391 aaPredicted RBP11.52□□□□□ -0.57
VANGL1-205ENST00000474344 EDN1P05305 212 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 SSBP05455 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
VANGL1-205ENST00000474344 PLS3P13797 630 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 NDUFA8P51970 172 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 RAD51AP2Q09MP3 1159 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.57
VANGL1-205ENST00000474344 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
VANGL1-205ENST00000474344 PPP2R5AQ15172 486 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 DDX12PQ92771 950 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 DHX58Q96C10 678 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 SLC9A7Q96T83 725 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 ADAM2Q99965 735 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 MTIF3Q9H2K0 278 aaKnown RBP11.52□□□□□ -0.57
VANGL1-205ENST00000474344 TNMDQ9H2S6 317 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 RC3H2Q9HBD1 1191 aaKnown RBP11.52□□□□□ -0.57
VANGL1-205ENST00000474344 CHST12Q9NRB3 414 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 AGPAT5Q9NUQ2 364 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 FAM13BQ9NYF5 915 aa11.52□□□□□ -0.57
VANGL1-205ENST00000474344 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 LRRIQ4A6NIV6 560 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 TSPAN1O60635 241 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 ZNF623O75123 536 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SLC34A2O95436 690 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 ATP2A2P16615 1042 aaKnown RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SFPQP23246 707 aaKnown RBP eCLIP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 EFNA5P52803 228 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 NCKAP1LP55160 1127 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 PEX3P56589 373 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 HTRA4P83105 476 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SNW1Q13573 536 aaKnown RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 UBXN11Q5T124 520 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 CATSPER4Q7RTX7 472 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 HERC6Q8IVU3 1022 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 FMR1NBQ8N0W7 255 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 FSIP1Q8NA03 581 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 TMEM161BQ8NDZ6 487 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 RASSF8Q8NHQ8 419 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 MRPS27Q92552 414 aaKnown RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 STAMQ92783 540 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 IFT74Q96LB3 600 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SCLT1Q96NL6 688 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 C7orf25Q9BPX7 421 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 KIFC3Q9BVG8 833 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 STRA6Q9BX79 667 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 TRIM9Q9C026 710 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 C2orf40Q9H1Z8 148 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 MAGEF1Q9HAY2 307 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 SERTAD1Q9UHV2 236 aa11.51□□□□□ -0.57
VANGL1-205ENST00000474344 PRRC2BQ5JSZ5 2229 aaKnown RBP11.51□□□□□ -0.57
VANGL1-205ENST00000474344 A0A0U1RQF3 1178 aa11.5□□□□□ -0.57
VANGL1-205ENST00000474344 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
VANGL1-205ENST00000474344 ZBBXA8MT70 800 aa11.5□□□□□ -0.57
VANGL1-205ENST00000474344 ACKR2O00590 384 aa11.5□□□□□ -0.57
VANGL1-205ENST00000474344 GADD45BO75293 160 aaPredicted RBP11.5□□□□□ -0.57
VANGL1-205ENST00000474344 PPP1R37O75864 691 aa11.5□□□□□ -0.57
VANGL1-205ENST00000474344 GJB5O95377 273 aa11.5□□□□□ -0.57
VANGL1-205ENST00000474344 ATF7P17544 494 aaPredicted RBP11.5□□□□□ -0.57
VANGL1-205ENST00000474344 ARF4P18085 180 aaPredicted RBP11.5□□□□□ -0.57
VANGL1-205ENST00000474344 AXLP30530 894 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms