RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ATP13A1Q9HD20 1204 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR108Q9NPR9 543 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 PRDM5Q9NQX1 630 aaPredicted RBP6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 TRMT13Q9NUP7 481 aaKnown RBP6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 EVA1BQ9NVM1 165 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 DDX18Q9NVP1 670 aaKnown RBP6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 LMCD1Q9NZU5 365 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 EIF2B4Q9UI10 523 aaKnown RBP6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 FKBPLQ9UIM3 349 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 RCAN3Q9UKA8 241 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 WDR37Q9Y2I8 494 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC88AQ3V6T2 1871 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 PPIP5K1Q6PFW1 1433 aa6.65□□□□□ -1.35
SMARCE1-208ENST00000474246 C4AP0C0L4 1744 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ANKRD36BQ8N2N9 1353 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 UBXN8O00124 270 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 CETN3O15182 167 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 TNFRSF21O75509 655 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 EYA4O95677 639 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 APOA4P06727 396 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 PRLRP16471 622 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 PRKAR1BP31321 381 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 NF2P35240 595 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 HNF4AP41235 474 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SULT1E1P49888 294 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 MNAT1P51948 309 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 BLVRAP53004 296 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ARPC4P59998 168 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 RUNX1T1Q06455 604 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SMUG1Q53HV7 270 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 NAA16Q6N069 864 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ALKBH5Q6P6C2 394 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 C11orf88Q6PI97 169 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 CORO6Q6QEF8 472 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 DBX2Q6ZNG2 339 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 IKBIPQ70UQ0 350 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SPATA24Q86W54 205 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 BBOF1Q8ND07 529 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 IL17RDQ8NFM7 739 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 DCAF11Q8TEB1 546 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 NOC3LQ8WTT2 800 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 CDKL2Q92772 493 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 NTPCRQ9BSD7 190 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 MKNK1Q9BUB5 465 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 KIAA1683Q9H0B3 1180 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 STMN4Q9H169 189 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 LUC7LQ9NQ29 371 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 AATFQ9NY61 560 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ANKIB1Q9P2G1 1089 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 HCSTQ9UBK5 93 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 C5P01031 1676 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 GPR75-ASB3A0A0A6YYF3 556 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 H7C0S8 307 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 AHCYL1O43865 530 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 BRINP1O60477 761 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 MAFKO60675 156 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 CTNND1O60716 968 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SNUPNO95149 360 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 IGHA2P01877 340 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ZSCAN22P10073 491 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 CPEP16870 476 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 TCF7P36402 384 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 DMPKQ09013 629 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 KCNH2Q12809 1159 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 MPP3Q13368 585 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 BBS9Q3SYG4 887 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 OTUD7BQ6GQQ9 843 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 PTCRAQ6ISU1 281 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 CCDC81Q6ZN84 652 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 PPFIBP1Q86W92 1011 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 PCSK9Q8NBP7 692 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 OR6C4Q8NGE1 309 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ADAMTS18Q8TE60 1221 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 GIMAP5Q96F15 307 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SPATA17Q96L03 361 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ZPBPQ9BS86 351 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 TSGA10Q9BZW7 698 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SEMA6BQ9H3T3 888 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 INTS10Q9NVR2 710 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 SIRT5Q9NXA8 310 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 MCM9Q9NXL9 1143 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 AGO2Q9UKV8 859 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 EFR3BQ9Y2G0 817 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 ZNF711Q9Y462 761 aa6.64□□□□□ -1.35
SMARCE1-208ENST00000474246 FRMPD2Q68DX3 1309 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 KDRP35968 1356 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 A0A087WZG4 1122 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 B4DLN1 442 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 PI4K2BG5E9Z4 385 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 ERC2O15083 957 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 TTI1O43156 1089 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 TSPAN1O60635 241 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 TSPAN3O60637 253 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 VIMP08670 466 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 PCNAP12004 261 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 TMEM11P17152 192 aa6.63□□□□□ -1.35
SMARCE1-208ENST00000474246 NPR3P17342 541 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms