RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TM4SF20Q53R12 229 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 YOD1Q5VVQ6 348 aaPredicted RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 CWF19L1Q69YN2 538 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 DLK2Q6UY11 383 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 LRRTM3Q86VH5 581 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 DDX42Q86XP3 938 aaKnown RBP eCLIP3.01□□□□□ -1.93
CALD1-216ENST00000473714 JAMLQ86YT9 394 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 RASAL3Q86YV0 1011 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 RPUSD2Q8IZ73 545 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 PPM1KQ8N3J5 372 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 USP38Q8NB14 1042 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 DAGLBQ8NCG7 672 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 KCTD13Q8WZ19 329 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 USP7Q93009 1102 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 MAGEB10Q96LZ2 347 aaPredicted RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 ASPNQ9BXN1 380 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 HDAC8Q9BY41 377 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 R3HDMLQ9H3Y0 253 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 NOL6Q9H6R4 1146 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.01□□□□□ -1.93
CALD1-216ENST00000473714 TNFRSF12AQ9NP84 129 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 WHRNQ9P202 907 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 THEGQ9P2T0 379 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 ING1Q9UK53 422 aaPredicted RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 PLA2G2DQ9UNK4 145 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 MAPRE3Q9UPY8 281 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 SF3B6Q9Y3B4 125 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 ZNF451Q9Y4E5 1061 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 NFAT5O94916 1531 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 FAM208AQ9UK61 1670 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 LAMB2P55268 1798 aa3□□□□□ -1.93
CALD1-216ENST00000473714 C9IYK1 514 aa3□□□□□ -1.93
CALD1-216ENST00000473714 MEIS1O00470 390 aa3□□□□□ -1.93
CALD1-216ENST00000473714 KPNA6O60684 536 aa3□□□□□ -1.93
CALD1-216ENST00000473714 EFCAB14O75071 495 aa3□□□□□ -1.93
CALD1-216ENST00000473714 RFPL3O75679 317 aa3□□□□□ -1.93
CALD1-216ENST00000473714 UBOX5O94941 541 aa3□□□□□ -1.93
CALD1-216ENST00000473714 VIL1P09327 827 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 FGFR1P11362 822 aa3□□□□□ -1.93
CALD1-216ENST00000473714 CAPN2P17655 700 aa3□□□□□ -1.93
CALD1-216ENST00000473714 SCNN1BP51168 640 aa3□□□□□ -1.93
CALD1-216ENST00000473714 GABREP78334 506 aa3□□□□□ -1.93
CALD1-216ENST00000473714 MVKQ03426 396 aa3□□□□□ -1.93
CALD1-216ENST00000473714 OS9Q13438 667 aaPredicted RBP3□□□□□ -1.93
CALD1-216ENST00000473714 SNW1Q13573 536 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 CFAP100Q494V2 611 aa3□□□□□ -1.93
CALD1-216ENST00000473714 SLC9C1Q4G0N8 1177 aa3□□□□□ -1.93
CALD1-216ENST00000473714 BRDTQ58F21 947 aaPredicted RBP3□□□□□ -1.93
CALD1-216ENST00000473714 FOXB2Q5VYV0 432 aa3□□□□□ -1.93
CALD1-216ENST00000473714 TMC3Q7Z5M5 1100 aa3□□□□□ -1.93
CALD1-216ENST00000473714 PPFIBP1Q86W92 1011 aa3□□□□□ -1.93
CALD1-216ENST00000473714 ZNF227Q86WZ6 799 aa3□□□□□ -1.93
CALD1-216ENST00000473714 C7orf61Q8IZ16 206 aa3□□□□□ -1.93
CALD1-216ENST00000473714 ZNF655Q8N720 491 aaPredicted RBP3□□□□□ -1.93
CALD1-216ENST00000473714 NUP43Q8NFH3 380 aa3□□□□□ -1.93
CALD1-216ENST00000473714 WDR66Q8TBY9 1149 aa3□□□□□ -1.93
CALD1-216ENST00000473714 BRF1Q92994 677 aa3□□□□□ -1.93
CALD1-216ENST00000473714 ZNF622Q969S3 477 aaKnown RBP eCLIP3□□□□□ -1.93
CALD1-216ENST00000473714 MTMR8Q96EF0 704 aa3□□□□□ -1.93
CALD1-216ENST00000473714 TCTN2Q96GX1 697 aa3□□□□□ -1.93
CALD1-216ENST00000473714 NAF1Q96HR8 494 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 EXOC2Q96KP1 924 aa3□□□□□ -1.93
CALD1-216ENST00000473714 CCDC140Q96MF4 163 aa3□□□□□ -1.93
CALD1-216ENST00000473714 ZDHHC15Q96MV8 337 aa3□□□□□ -1.93
CALD1-216ENST00000473714 SMAD5Q99717 465 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 TARS2Q9BW92 718 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 LGR4Q9BXB1 951 aa3□□□□□ -1.93
CALD1-216ENST00000473714 MRPL4Q9BYD3 311 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 PCGF6Q9BYE7 350 aa3□□□□□ -1.93
CALD1-216ENST00000473714 C14orf93Q9H972 538 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 ARHGEF4Q9NR80 690 aa3□□□□□ -1.93
CALD1-216ENST00000473714 NTMQ9P121 344 aa3□□□□□ -1.93
CALD1-216ENST00000473714 APEX2Q9UBZ4 518 aa3□□□□□ -1.93
CALD1-216ENST00000473714 SRP68Q9UHB9 627 aaKnown RBP3□□□□□ -1.93
CALD1-216ENST00000473714 MINPP1Q9UNW1 487 aa3□□□□□ -1.93
CALD1-216ENST00000473714 MRC1P22897 1456 aa3□□□□□ -1.93
CALD1-216ENST00000473714 PCSK5Q92824 1860 aa3□□□□□ -1.93
CALD1-216ENST00000473714 ZNF609O15014 1411 aa3□□□□□ -1.93
CALD1-216ENST00000473714 KDM3BQ7LBC6 1761 aa3□□□□□ -1.93
CALD1-216ENST00000473714 ADGRB1O14514 1584 aa3□□□□□ -1.93
CALD1-216ENST00000473714 CARMIL3Q8ND23 1372 aa3□□□□□ -1.93
CALD1-216ENST00000473714 USP42Q9H9J4 1324 aaKnown RBP2.99□□□□□ -1.93
CALD1-216ENST00000473714 SPTBN4Q9H254 2564 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 TPRP12270 2363 aaKnown RBP2.99□□□□□ -1.93
CALD1-216ENST00000473714 ZNF646O15015 1829 aaPredicted RBP2.99□□□□□ -1.93
CALD1-216ENST00000473714 A0A1W2PQ45 241 aaPredicted RBP2.99□□□□□ -1.93
CALD1-216ENST00000473714 A0A1W2PQY0 241 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 BLACEA4D250 179 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 B4E1Z4 1266 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 PI4K2BG5E9Z4 385 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 PRC1O43663 620 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 PEX14O75381 377 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 ALDH1L1O75891 902 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 CPP00450 1065 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 SERPINB2P05120 415 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 GJB1P08034 283 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 SYPP08247 313 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 CT47B1P0C2W7 299 aaPredicted RBP2.99□□□□□ -1.93
CALD1-216ENST00000473714 JMJD7P0C870 316 aa2.99□□□□□ -1.93
CALD1-216ENST00000473714 PYGMP11217 842 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms