RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 GLRA2P23416 452 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 PRKCZQ05513 592 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 POU5F1BQ06416 359 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 KCNA1Q09470 495 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 TBX2Q13207 712 aaPredicted RBP14.05□□□□□ -0.16
VPS13D-205ENST00000473099 ZBTB8OSQ8IWT0 167 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 CCDC112Q8NEF3 446 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 TRIB2Q92519 343 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 ARHGAP39Q9C0H5 1083 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 SRRDQ9UH36 339 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
VPS13D-205ENST00000473099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS13D-205ENST00000473099 ANK1P16157 1881 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 K7ERI5 159 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 GPR25O00155 361 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 CLIC2O15247 247 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 SEPT4O43236 478 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 ADCY6O43306 1168 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 ADCY3O60266 1144 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 C22orf31O95567 290 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 PIGRP01833 764 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 ZNF286BP0CG31 522 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 GARTP22102 1010 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 PTGS1P23219 599 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 MSNP26038 577 aaKnown RBP14.04□□□□□ -0.16
VPS13D-205ENST00000473099 NKX3-2P78367 333 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 CDC42EP1Q00587 391 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 ENPEPQ07075 957 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 PPFIA1Q13136 1202 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 MIIPQ5JXC2 388 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 CEP135Q66GS9 1140 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 ARMCX5Q6P1M9 558 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 CNGA4Q8IV77 575 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 LRRC8AQ8IWT6 810 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 FAM186BQ8IYM0 893 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 ASAP3Q8TDY4 903 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 CCDC51Q96ER9 411 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 EEF2KMTQ96G04 330 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 RNPEPQ9H4A4 650 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
VPS13D-205ENST00000473099 HNRNPDLO14979 420 aaKnown RBP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 ZEB2O60315 1214 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 EXOC3O60645 756 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 FKTNO75072 461 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 HMGCRP04035 888 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 RARBP10826 455 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 CNGA1P29973 690 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 SOX10P56693 466 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 GJA9P57773 515 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 CAPSQ13938 189 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 FIGNQ5HY92 759 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 CDCA2Q69YH5 1023 aaPredicted RBP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 EFCAB12Q6NXP0 572 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 INTS8Q75QN2 995 aaKnown RBP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 USP37Q86T82 979 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 ZNF710Q8N1W2 664 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 XXYLT1Q8NBI6 393 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 PRPF31Q8WWY3 499 aaKnown RBP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 BICD1Q96G01 975 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 MAP7D2Q96T17 732 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 NFKBIZQ9BYH8 718 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 UPF3AQ9H1J1 476 aaKnown RBP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 SUGCTQ9HAC7 445 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 KIAA1586Q9HCI6 787 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 SUCLA2Q9P2R7 463 aaPredicted RBP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS13D-205ENST00000473099 ADGRA3Q8IWK6 1321 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 NRCAMQ92823 1304 aa14.03□□□□□ -0.16
VPS13D-205ENST00000473099 GTPBP10A4D1E9 387 aaKnown RBP14.02□□□□□ -0.17
VPS13D-205ENST00000473099 AKR1B15C9JRZ8 316 aaPredicted RBP14.02□□□□□ -0.17
VPS13D-205ENST00000473099 HAS3O00219 553 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 AKAP3O75969 853 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 KRT13P13646 458 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 KLRC1P26715 233 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 LIG4P49917 911 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 CYP2J2P51589 502 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 GRIK4Q16099 956 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
VPS13D-205ENST00000473099 ZPBP2Q6X784 338 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 KSR1Q8IVT5 923 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 METTL13Q8N6R0 699 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 CD99L2Q8TCZ2 262 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 HSPBP1Q9NZL4 362 aa14.02□□□□□ -0.17
VPS13D-205ENST00000473099 RALGAPA2Q2PPJ7 1873 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 ESPNB1AK53 854 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 N4BP1O75113 896 aaKnown RBP14.01□□□□□ -0.17
VPS13D-205ENST00000473099 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
VPS13D-205ENST00000473099 AFPP02771 609 aaKnown RBP14.01□□□□□ -0.17
VPS13D-205ENST00000473099 GNAT1P11488 350 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 PHKA2P46019 1235 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 PSEN2P49810 448 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 KCNH2Q12809 1159 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 MFSD10Q14728 455 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 SYCP1Q15431 976 aa14.01□□□□□ -0.17
VPS13D-205ENST00000473099 MAPK6Q16659 721 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms