RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CUTAO60888 179 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 MAFO75444 373 aaPredicted RBP10.12□□□□□ -0.79
SMC4-214ENST00000472991 SELPP16109 830 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 PLCG1P19174 1290 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 ME1P48163 572 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 RARRES1P49788 294 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 POLGP54098 1239 aaPredicted RBP10.12□□□□□ -0.79
SMC4-214ENST00000472991 TMEM62Q0P6H9 643 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 EMC2Q15006 297 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 KARSQ15046 597 aaKnown RBP10.12□□□□□ -0.79
SMC4-214ENST00000472991 TMEM119Q4V9L6 283 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 HYIQ5T013 277 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 ZNF618Q5T7W0 954 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 MFSD5Q6N075 450 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 EFCAB12Q6NXP0 572 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 LRRC8DQ7L1W4 858 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 LINC01465Q8N7H1 131 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 RETREG2Q8NC44 543 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 BADQ92934 168 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 CALML4Q96GE6 196 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 NT5C3AQ9H0P0 336 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 SUGCTQ9HAC7 445 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 RCOR1Q9UKL0 485 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
SMC4-214ENST00000472991 IGKV6-21A0A0C4DH24 114 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 CAPN5O15484 640 aaPredicted RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 SLC26A4O43511 780 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 CAND2O75155 1236 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 EYA4O95677 639 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 VTNP04004 478 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMC4-214ENST00000472991 TXLNAP40222 546 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 RFC5P40937 340 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 MAGEA10P43363 369 aaPredicted RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 MRPS6P82932 125 aaKnown RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 FPGSQ05932 587 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 NFX1Q12986 1120 aaKnown RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 DRP2Q13474 957 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 AXDND1Q5T1B0 1012 aaPredicted RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 RSPH3Q86UC2 560 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 KIAA0319LQ8IZA0 1049 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 MAP7D2Q96T17 732 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 PPP1R16BQ96T49 567 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 LBHD1Q9BQE6 289 aaPredicted RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 JPH2Q9BR39 696 aaPredicted RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 CCSER1Q9C0I3 900 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 SCAND2PQ9GZW5 306 aaPredicted RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 ATP6V0A4Q9HBG4 840 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 XPNPEP1Q9NQW7 623 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 DBR1Q9UK59 544 aaKnown RBP10.11□□□□□ -0.79
SMC4-214ENST00000472991 PCDHA7Q9UN72 937 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 AKT3Q9Y243 479 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 CDY2AQ9Y6F7 541 aa10.11□□□□□ -0.79
SMC4-214ENST00000472991 A0A087X0B3 334 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 RSPH10B2B2RC85 870 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 M0QZ92 97 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 RPLP2P05387 115 aaKnown RBP10.1□□□□□ -0.79
SMC4-214ENST00000472991 SSBP05455 408 aaKnown RBP eCLIP10.1□□□□□ -0.799e-17■■■■■ 55.5
SMC4-214ENST00000472991 IQCF3P0C7M6 154 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 RSPH10BP0C881 870 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 CSF2RAP15509 400 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TMOD1P28289 359 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 MGAT3Q09327 533 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 MBTPS1Q14703 1052 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TRIM46Q7Z4K8 759 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TMEM199Q8N511 208 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TMEM143Q96AN5 459 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 ZNF668Q96K58 619 aaPredicted RBP10.1□□□□□ -0.79
SMC4-214ENST00000472991 BLOC1S4Q9NUP1 217 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 CCDC39Q9UFE4 941 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 DNM3Q9UQ16 869 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TRPV2Q9Y5S1 764 aa10.1□□□□□ -0.79
SMC4-214ENST00000472991 TRIP11Q15643 1979 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 GAS2O43903 313 aaKnown RBP10.09□□□□□ -0.79
SMC4-214ENST00000472991 NBNO60934 754 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 WFS1O76024 890 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 CHRNA1P02708 482 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 PLA2G4BP0C869 781 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 ACRP10323 421 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 BMP1P13497 986 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 DNM2P50570 870 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 PPIGQ13427 754 aaKnown RBP eCLIP10.09□□□□□ -0.792e-27■■■■■ 81.9
SMC4-214ENST00000472991 KIZQ2M2Z5 673 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 IER5Q5VY09 327 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 MAEAQ7L5Y9 396 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 DEFB128Q7Z7B8 93 aa10.09□□□□□ -0.79
SMC4-214ENST00000472991 EXOC8Q8IYI6 725 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms