RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KLHL40Q2TBA0 621 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 RILPL1Q5EBL4 403 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 EARS2Q5JPH6 523 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 TTC38Q5R3I4 469 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 CAVIN1Q6NZI2 390 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 SEPT14Q6ZU15 432 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 KRT25Q7Z3Z0 450 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 SMRP1Q8NCR6 262 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 ATOH1Q92858 354 aaPredicted RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 CUL5Q93034 780 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 EMID1Q96A84 441 aaPredicted RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 KCTD15Q96SI1 283 aaPredicted RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 AMNQ9BXJ7 453 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 IFIH1Q9BYX4 1025 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 LMAN2LQ9H0V9 348 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 RC3H2Q9HBD1 1191 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 RIC8AQ9NPQ8 531 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 CLEC1BQ9P126 229 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 COL20A1Q9P218 1284 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 DDX41Q9UJV9 622 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHA6Q9UN73 950 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHGA11Q9Y5H2 935 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHA1Q9Y5I3 950 aa7.18□□□□□ -1.26
HDAC1-205ENST00000472928 MAP1BP46821 2468 aaKnown RBP7.18□□□□□ -1.26
HDAC1-205ENST00000472928 DNAH14Q0VDD8 3507 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 ATRXP46100 2492 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 PRR23AA6NEV1 266 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 H0Y858 1186 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 M0R2N6 131 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 WNT7AO00755 349 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 SPTLC2O15270 562 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 UPP2O95045 317 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 RB1P06400 928 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 BMPR1AP36894 532 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 TOB1P50616 345 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 SIGLEC14Q08ET2 396 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 USP4Q13107 963 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 NONOQ15233 471 aaKnown RBP eCLIP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 INF2Q27J81 1249 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 INTS6LQ5JSJ4 861 aaKnown RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 JAKMIP3Q5VZ66 844 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 LINC00301Q8NCQ3 95 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 PPTC7Q8NI37 304 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 SYTL5Q8TDW5 730 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 SEPT8Q92599 483 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 TBC1D5Q92609 795 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 PGBD1Q96JS3 809 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 MPHOSPH6Q99547 160 aaKnown RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 KATNAL1Q9BW62 490 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 IGFLR1Q9H665 355 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 TLR9Q9NR96 1032 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 TMEM260Q9NX78 707 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 RCOR1Q9UKL0 485 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 CEP131Q9UPN4 1083 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 PCDHB6Q9Y5E3 794 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 ABCB11O95342 1321 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 MYH9P35579 1960 aaKnown RBP7.17□□□□□ -1.26
HDAC1-205ENST00000472928 MYH11P35749 1972 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 TTC3P53804 2025 aa7.17□□□□□ -1.26
HDAC1-205ENST00000472928 B4DLN1 442 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 RGS20O76081 388 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 CSPG5O95196 566 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 GLP2RO95838 553 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 BMP15O95972 392 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 PDGFBP01127 241 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-205ENST00000472928 CTSHP09668 335 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 DNAJB1P25685 340 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 MARCKSP29966 332 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-205ENST00000472928 TRAPPC10P48553 1259 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 MRPL12P52815 198 aaKnown RBP7.16□□□□□ -1.26
HDAC1-205ENST00000472928 COASYQ13057 564 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 TRAF1Q13077 416 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 LAMC2Q13753 1193 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 SLC39A14Q15043 492 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 PTPAQ15257 358 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 ZNF174Q15697 407 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 CCDC73Q6ZRK6 1079 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 ERMP1Q7Z2K6 904 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 ADGRD2Q7Z7M1 963 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 FIBCD1Q8N539 461 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 FSIP1Q8NA03 581 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 MRPS27Q92552 414 aaKnown RBP7.16□□□□□ -1.26
HDAC1-205ENST00000472928 SYAP1Q96A49 352 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-205ENST00000472928 TAAR1Q96RJ0 339 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 C16orf70Q9BSU1 422 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 GLT8D2Q9H1C3 349 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 PSTPIP2Q9H939 334 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 PNMA2Q9UL42 364 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 USP15Q9Y4E8 981 aaPredicted RBP7.16□□□□□ -1.26
HDAC1-205ENST00000472928 ADGRA3Q8IWK6 1321 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 MYO10Q9HD67 2058 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 FRYLO94915 3013 aa7.16□□□□□ -1.26
HDAC1-205ENST00000472928 C17orf102A2RUQ5 167 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 OPLAHO14841 1288 aa7.15□□□□□ -1.26
HDAC1-205ENST00000472928 TREHO43280 583 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms