RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 KRT79Q5XKE5 535 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 MAEAQ7L5Y9 396 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 KSR1Q8IVT5 923 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 LINC01599Q8WXQ3 324 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 TGS1Q96RS0 853 aaKnown RBP13.21□□□□□ -0.29
CLRN1-205ENST00000472224 FDXACB1Q9BRP7 624 aaPredicted RBP13.21□□□□□ -0.29
CLRN1-205ENST00000472224 FTHL17Q9BXU8 183 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.29
CLRN1-205ENST00000472224 DHX33Q9H6R0 707 aaKnown RBP13.21□□□□□ -0.29
CLRN1-205ENST00000472224 ST3GAL5Q9UNP4 418 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 SQORQ9Y6N5 450 aa13.21□□□□□ -0.29
CLRN1-205ENST00000472224 PLXNA3P51805 1871 aa13.21□□□□□ -0.3
CLRN1-205ENST00000472224 GAS2O43903 313 aaKnown RBP13.2□□□□□ -0.3
CLRN1-205ENST00000472224 CSDE1O75534 798 aaKnown RBP13.2□□□□□ -0.3
CLRN1-205ENST00000472224 GJB5O95377 273 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 BMP15O95972 392 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
CLRN1-205ENST00000472224 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
CLRN1-205ENST00000472224 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 TCP11Q8WWU5 503 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 MFSD14AQ96MC6 490 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 NACC1Q96RE7 527 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 TMX1Q9H3N1 280 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
CLRN1-205ENST00000472224 KIAA1024Q9UPX6 916 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 KIAA1671Q9BY89 1806 aa13.2□□□□□ -0.3
CLRN1-205ENST00000472224 SPTBN4Q9H254 2564 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ENPP3O14638 875 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 MGEA5O60502 916 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 DGAT1O75907 488 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
CLRN1-205ENST00000472224 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 TCF15Q12870 199 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 COL19A1Q14993 1142 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ECM1Q16610 540 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
CLRN1-205ENST00000472224 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 PLIN2Q99541 437 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 RAD9AQ99638 391 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ADAM2Q99965 735 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 C17orf80Q9BSJ5 609 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-205ENST00000472224 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
CLRN1-205ENST00000472224 XPNPEP1Q9NQW7 623 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 MUTYHQ9UIF7 546 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 LRFN2Q9ULH4 789 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 CLIC4Q9Y696 253 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
CLRN1-205ENST00000472224 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
CLRN1-205ENST00000472224 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 DMDP11532 3685 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 PTPN5P54829 565 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 CDC42EP1Q00587 391 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 PDIA5Q14554 519 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 ARL6IP4Q66PJ3 421 aaKnown RBP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 RASSF8Q8NHQ8 419 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 MRPL38Q96DV4 380 aaKnown RBP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 DBR1Q9UK59 544 aaKnown RBP13.18□□□□□ -0.3
CLRN1-205ENST00000472224 INSL6Q9Y581 213 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
CLRN1-205ENST00000472224 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 STK25O00506 426 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 STAG3L1P0CL83 205 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 ZSCAN20P17040 1043 aaPredicted RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 MUTP22033 750 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 TIE1P35590 1138 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 FOXK2Q01167 660 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 TFDP1Q14186 410 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 RTN4RL1Q86UN2 441 aaPredicted RBP13.17□□□□□ -0.3
CLRN1-205ENST00000472224 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
CLRN1-205ENST00000472224 RNF169Q8NCN4 708 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms