RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	TTC28	Q96AY4	2481 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	PTPDC1	A2A3K4	754 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	GOLGA6L9	A6NEM1	432 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	USP27X	A6NNY8	438 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	BECN2	A8MW95	431 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	EFCAB8	A8MWE9	144 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	TULP2	O00295	520 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	RGS13	O14921	159 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	FOXP2	O15409	715 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	DHX16	O60231	1041 aa	Known RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	GREM1	O60565	184 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	EFEMP2	O95967	443 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	ANXA1	P04083	346 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	SNRPA1	P09661	255 aa	Known RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	PHKG2	P15735	406 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	RAG1	P15918	1043 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	RPL10	P27635	214 aa	Known RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	CYP2C19	P33261	490 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	CNR2	P34972	360 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	IL15	P40933	162 aa	Predicted RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	ECE1	P42892	770 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	TEK	Q02763	1124 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	RAD51AP2	Q09MP3	1159 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	TUBB2A	Q13885	445 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	SLC39A14	Q15043	492 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	ALX1	Q15699	326 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	ARMCX5	Q6P1M9	558 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	FBXO38	Q6PIJ6	1188 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	RNF111	Q6ZNA4	994 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	COPS6	Q7L5N1	327 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	FILIP1	Q7Z7B0	1213 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	REXO1L1P	Q8IX06	675 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	USHBP1	Q8N6Y0	703 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	FSIP1	Q8NA03	581 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	FBXO27	Q8NI29	283 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	BICD2	Q8TD16	824 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	LOXL4	Q96JB6	756 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	PPP1R13B	Q96KQ4	1090 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	GPR101	Q96P66	508 aa	Predicted RBP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	MPHOSPH8	Q99549	860 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	MTA3	Q9BTC8	594 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	TUBB2B	Q9BVA1	445 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	PLA2G12B	Q9BX93	195 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	KBTBD4	Q9NVX7	518 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	PSD3	Q9NYI0	1048 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	USP16	Q9Y5T5	823 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	FHOD1	Q9Y613	1164 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	ITGB4	P16144	1822 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZMYM6	O95789	1325 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	CPD	O75976	1380 aa		4.13	□□□□□ -1.75
CSMD2-208	ENST00000471438	KIAA1551	Q9HCM1	1747 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	BTAF1	O14981	1849 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC66	A2RUB6	948 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	PRAMEF22	A3QJZ6	481 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	GLTPD2	A6NH11	291 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	EYA2	O00167	538 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SPTLC2	O15270	562 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	TLR3	O15455	904 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CBFA2T2	O43439	604 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	NRDC	O43847	1150 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	STX10	O60499	249 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	FZD7	O75084	574 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	USP2	O75604	605 aa	Predicted RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF202	O95125	648 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CSF1R	P07333	972 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SLC3A2	P08195	630 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	PNLIP	P16233	465 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SARS	P49591	514 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	NDUFA8	P51970	172 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	PCBP3	P57721	371 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	EVA1C	P58658	441 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	TPM4	P67936	248 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	FANCC	Q00597	558 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	APOBR	Q0VD83	1088 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	PTPA	Q15257	358 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CHRNA2	Q15822	529 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	DDB1	Q16531	1140 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	ARSH	Q5FYA8	562 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	MUM1L1	Q5H9M0	696 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC158	Q5M9N0	1113 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	RESP18	Q5W5W9	173 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	ANO1	Q5XXA6	986 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CYP4F22	Q6NT55	531 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	FBXL19	Q6PCT2	694 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	RSRC2	Q7L4I2	434 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	TMC6	Q7Z403	805 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SGMS1	Q86VZ5	419 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	TMEM139	Q8IV31	216 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	IFNL2	Q8IZJ0	200 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	TTC9B	Q8N6N2	239 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF655	Q8N720	491 aa	Predicted RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	IQUB	Q8NA54	791 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC191	Q8NCU4	936 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SPATA20	Q8TB22	786 aa		4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.12	□□□□□ -1.75
CSMD2-208	ENST00000471438	DDX1	Q92499	740 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms