RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TMEM9BQ9NQ34 198 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 HELLSQ9NRZ9 838 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 RNF19AQ9NV58 838 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 HSPBP1Q9NZL4 362 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.76□□□□□ -1.33
VARS-222ENST00000470953 LRRK2Q5S007 2527 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 ASCC3Q8N3C0 2202 aaKnown RBP6.76□□□□□ -1.33
VARS-222ENST00000470953 CLUHO75153 1309 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 CCDC171Q6TFL3 1326 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 NRCAMQ92823 1304 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 SALL3Q9BXA9 1300 aa6.76□□□□□ -1.33
VARS-222ENST00000470953 SPENQ96T58 3664 aaKnown RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 A0A0D9SFI3 127 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 MBLAC1A4D2B0 266 aaPredicted RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 PCNX2A6NKB5 2137 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 SPDYE4A6NLX3 237 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 C9IYK1 514 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 NT5C1B-RDH14C9J2C7 533 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 K7ESF4 209 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 RANBP6O60518 1105 aaKnown RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 IGHDP01880 384 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 GOLGA8HP0CJ92 632 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 MYBP10242 640 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 PDHBP11177 359 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 KRT10P13645 584 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 LAG3P18627 525 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 FAM193AP78312 1265 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 CTDSPL2Q05D32 466 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 SEMA3FQ13275 785 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 NMIQ13287 307 aaPredicted RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 MCMDC2Q4G0Z9 681 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 TAF2Q6P1X5 1199 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 MAMSTRQ6ZN01 415 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 CYFIP1Q7L576 1253 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 TMEM173Q86WV6 379 aaPredicted RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 IFNL3Q8IZI9 196 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 ZNF687Q8N1G0 1237 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 SLC39A11Q8N1S5 342 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 GLG1Q92896 1179 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 FGF14Q92915 247 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 FAM227BQ96M60 508 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 CASD1Q96PB1 797 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 PHF12Q96QT6 1004 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 NELL2Q99435 816 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 ADAM2Q99965 735 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 TMEM47Q9BQJ4 181 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 PDCD2LQ9BRP1 358 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 CDHR5Q9HBB8 845 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 NDRG2Q9UN36 371 aaKnown RBP6.75□□□□□ -1.33
VARS-222ENST00000470953 PCDHGA5Q9Y5G8 931 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 DOCK6Q96HP0 2047 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 IGSF9BQ9UPX0 1349 aa6.75□□□□□ -1.33
VARS-222ENST00000470953 MUC22E2RYF6 1773 aaPredicted RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 ITPR2Q14571 2701 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 NOP56O00567 594 aaKnown RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 LAMP2P13473 410 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 MARK3P27448 753 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 CXCL12P48061 93 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 IGBP1P78318 339 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 SP4Q02446 784 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 KRT17Q04695 432 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 ZNF543Q08ER8 600 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 NFX1Q12986 1120 aaKnown RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 PPFIA1Q13136 1202 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 PAK2Q13177 524 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 GAS6Q14393 721 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 PGM5Q15124 567 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 GRIK4Q16099 956 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 PARM1Q6UWI2 310 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 CWC27Q6UX04 472 aaKnown RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 C15orf39Q6ZRI6 1047 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 VSIG10LQ86VR7 867 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 FMNL3Q8IVF7 1028 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 PLEKHM2Q8IWE5 1019 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 BCL7CQ8WUZ0 217 aaPredicted RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 TMEM40Q8WWA1 233 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 ZNF558Q96NG5 402 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 SLC32A1Q9H598 525 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 WDR6Q9NNW5 1121 aaKnown RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 RGS18Q9NS28 235 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 SPG21Q9NZD8 308 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 DKK4Q9UBT3 224 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 TUBE1Q9UJT0 475 aa6.74□□□□□ -1.33
VARS-222ENST00000470953 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 KIF26AQ9ULI4 1882 aaPredicted RBP6.74□□□□□ -1.33
VARS-222ENST00000470953 LRBAP50851 2863 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 FOXP2O15409 715 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 CFBP00751 764 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 TGFB3P10600 412 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 HSPD1P10809 573 aaKnown RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 SDSP20132 328 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 HOXA13P31271 388 aaPredicted RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 METAP2P50579 478 aaKnown RBP eCLIP6.73□□□□□ -1.335e-7■□□□□ 8.9
VARS-222ENST00000470953 HAND2P61296 217 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 CYP4F3Q08477 520 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 SERINC3Q13530 473 aa6.73□□□□□ -1.33
VARS-222ENST00000470953 CDC37Q16543 378 aaPredicted RBP6.73□□□□□ -1.33
VARS-222ENST00000470953 TTC22Q5TAA0 569 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms