RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 RAB27AP51159 221 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 MXD4Q14582 209 aaPredicted RBP15.66■□□□□ 0.1
COMMD3-208ENST00000470045 CSPP1Q1MSJ5 1256 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 LRRC55Q6ZSA7 311 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 CATSPER4Q7RTX7 472 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 LRRC43Q8N309 656 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 COLGALT1Q8NBJ5 622 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 RNF149Q8NC42 400 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 AAASQ9NRG9 546 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 PCDHB6Q9Y5E3 794 aa15.66■□□□□ 0.1
COMMD3-208ENST00000470045 SRGAP2CP0DJJ0 459 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 SKIP12755 728 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 HOXA11P31270 313 aaPredicted RBP15.65■□□□□ 0.1
COMMD3-208ENST00000470045 PTENP60484 403 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 UBE3AQ05086 875 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 CAPSQ13938 189 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 PCBP1Q15365 356 aaKnown RBP eCLIP15.65■□□□□ 0.1
COMMD3-208ENST00000470045 TWF2Q6IBS0 349 aaKnown RBP15.65■□□□□ 0.1
COMMD3-208ENST00000470045 POTEGQ6S5H5 508 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 IGSF22Q8N9C0 903 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 ASAP3Q8TDY4 903 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 PABPC5Q96DU9 382 aaKnown RBP15.65■□□□□ 0.1
COMMD3-208ENST00000470045 NFKBIZQ9BYH8 718 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 BACH2Q9BYV9 841 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.65■□□□□ 0.1
COMMD3-208ENST00000470045 FAM105AQ9NUU6 356 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 PCDHB12Q9Y5F1 795 aa15.65■□□□□ 0.1
COMMD3-208ENST00000470045 BDP1A6H8Y1 2624 aa15.64■□□□□ 0.1
COMMD3-208ENST00000470045 LAD1O00515 517 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 USO1O60763 962 aaKnown RBP15.64■□□□□ 0.09
COMMD3-208ENST00000470045 GLRA2P23416 452 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 PRPHP41219 470 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 HYAL1Q12794 435 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 PTGDRQ13258 359 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 PDIA5Q14554 519 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 CTC1Q2NKJ3 1217 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 LEXMQ3ZCV2 418 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 RILPL1Q5EBL4 403 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 HAUS3Q68CZ6 603 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 ABI1Q8IZP0 508 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 RNF169Q8NCN4 708 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 HELQQ8TDG4 1101 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 CCDC43Q96MW1 224 aaKnown RBP15.64■□□□□ 0.09
COMMD3-208ENST00000470045 DCBLD2Q96PD2 775 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 NACC1Q96RE7 527 aa15.64■□□□□ 0.09
COMMD3-208ENST00000470045 MRPL9Q9BYD2 267 aaKnown RBP15.64■□□□□ 0.09
COMMD3-208ENST00000470045 A0A087WWV3 80 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 NCK2O43639 380 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 FGF18O76093 207 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 IRS1P35568 1242 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 PLCB3Q01970 1234 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 CUL4AQ13619 759 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 TFDP1Q14186 410 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 AMHR2Q16671 573 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 UBXN11Q5T124 520 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 SPOUT1Q5T280 376 aaKnown RBP15.63■□□□□ 0.09
COMMD3-208ENST00000470045 MRPL10Q7Z7H8 261 aaKnown RBP15.63■□□□□ 0.09
COMMD3-208ENST00000470045 MCPH1Q8NEM0 835 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 UHRF1Q96T88 793 aaPredicted RBP15.63■□□□□ 0.09
COMMD3-208ENST00000470045 POLR3FQ9H1D9 316 aaPredicted RBP15.63■□□□□ 0.09
COMMD3-208ENST00000470045 SMC3Q9UQE7 1217 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 LZTS1Q9Y250 596 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.63■□□□□ 0.09
COMMD3-208ENST00000470045 MUC3AQ02505 3323 aa15.63■□□□□ 0.09
COMMD3-208ENST00000470045 MEIS3P2A8K0S8 358 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 TSPAN1O60635 241 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 KCNA5P22460 613 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 AXLP30530 894 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 PPM1AP35813 382 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 LTBRP36941 435 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 MBTD1Q05BQ5 628 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 ECM1Q16610 540 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 KCNT2Q6UVM3 1135 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 THNSL1Q8IYQ7 743 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.62■□□□□ 0.09
COMMD3-208ENST00000470045 LPPQ93052 612 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 ZNF558Q96NG5 402 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 LRWD1Q9UFC0 647 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 PCDHB2Q9Y5E7 798 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 STK24Q9Y6E0 443 aa15.62■□□□□ 0.09
COMMD3-208ENST00000470045 TNFRSF10AO00220 468 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 FSCN2O14926 492 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 ERLIN2O94905 339 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 CCT6AP40227 531 aaKnown RBP15.61■□□□□ 0.09
COMMD3-208ENST00000470045 ATP2C1P98194 919 aaPredicted RBP15.61■□□□□ 0.09
COMMD3-208ENST00000470045 IL17AQ16552 155 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 CDCA2Q69YH5 1023 aaPredicted RBP15.61■□□□□ 0.09
COMMD3-208ENST00000470045 MCTP1Q6DN14 999 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 AGMOQ6ZNB7 445 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 ADGRD2Q7Z7M1 963 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 SLC39A11Q8N1S5 342 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 MRPS27Q92552 414 aaKnown RBP15.61■□□□□ 0.09
COMMD3-208ENST00000470045 PGBD4Q96DM1 585 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 CCDC51Q96ER9 411 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 NECAB3Q96P71 396 aaPredicted RBP15.61■□□□□ 0.09
COMMD3-208ENST00000470045 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 GPRC5CQ9NQ84 441 aa15.61■□□□□ 0.09
COMMD3-208ENST00000470045 TLR9Q9NR96 1032 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms