RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PCDHB6Q9Y5E3 794 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 C5orf42Q9H799 3197 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 NCK2O43639 380 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 ZNF623O75123 536 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 SKIP12755 728 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 LAG3P18627 525 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 PTENP60484 403 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 POU5F1BQ06416 359 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 PTGDRQ13258 359 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 PDIA5Q14554 519 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 CSPP1Q1MSJ5 1256 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 MCTP1Q6DN14 999 aa19.02■□□□□ 0.64
SSBP1-207ENST00000468267 PABPC5Q96DU9 382 aaKnown RBP19.02■□□□□ 0.64
SSBP1-207ENST00000468267 MUTP22033 750 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 KCNA5P22460 613 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 HOXA11P31270 313 aaPredicted RBP19.01■□□□□ 0.63
SSBP1-207ENST00000468267 RAB27AP51159 221 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 UBE3AQ05086 875 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 TFDP1Q14186 410 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 LEXMQ3ZCV2 418 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 POTEGQ6S5H5 508 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 IFNLR1Q8IU57 520 aaPredicted RBP19.01■□□□□ 0.63
SSBP1-207ENST00000468267 LRRC43Q8N309 656 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 HELQQ8TDG4 1101 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 ASAP3Q8TDY4 903 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 POF1BQ8WVV4 589 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 UHRF1Q96T88 793 aaPredicted RBP19.01■□□□□ 0.63
SSBP1-207ENST00000468267 BACH2Q9BYV9 841 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 FAM105AQ9NUU6 356 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 LRWD1Q9UFC0 647 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
SSBP1-207ENST00000468267 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.01■□□□□ 0.63
SSBP1-207ENST00000468267 H3BQV1 296 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 LAD1O00515 517 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 USO1O60763 962 aaKnown RBP19■□□□□ 0.63
SSBP1-207ENST00000468267 FGF18O76093 207 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 GLRA2P23416 452 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 HYAL1Q12794 435 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 PCBP1Q15365 356 aaKnown RBP eCLIP19■□□□□ 0.63
SSBP1-207ENST00000468267 THNSL1Q8IYQ7 743 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 RSPH1Q8WYR4 309 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 EIF4ENIF1Q9NRA8 985 aaKnown RBP19■□□□□ 0.63
SSBP1-207ENST00000468267 PCDHB2Q9Y5E7 798 aa19■□□□□ 0.63
SSBP1-207ENST00000468267 TNFRSF10AO00220 468 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 CSPG5O95196 566 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 IRS1P35568 1242 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 CAPSQ13938 189 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 CTC1Q2NKJ3 1217 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 RILPL1Q5EBL4 403 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 HAUS3Q68CZ6 603 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 KCNT2Q6UVM3 1135 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 MRPL10Q7Z7H8 261 aaKnown RBP18.99■□□□□ 0.63
SSBP1-207ENST00000468267 IGSF22Q8N9C0 903 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 MCPH1Q8NEM0 835 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 LPPQ93052 612 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 ZNF558Q96NG5 402 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 MRPL9Q9BYD2 267 aaKnown RBP18.99■□□□□ 0.63
SSBP1-207ENST00000468267 NFKBIZQ9BYH8 718 aa18.99■□□□□ 0.63
SSBP1-207ENST00000468267 POLR3FQ9H1D9 316 aaPredicted RBP18.99■□□□□ 0.63
SSBP1-207ENST00000468267 ERLIN2O94905 339 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 CCT6AP40227 531 aaKnown RBP18.98■□□□□ 0.63
SSBP1-207ENST00000468267 PRPHP41219 470 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 PLCB3Q01970 1234 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 ECM1Q16610 540 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 LONRF3Q496Y0 759 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 UBXN11Q5T124 520 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.98■□□□□ 0.63
SSBP1-207ENST00000468267 PPP2R3CQ969Q6 453 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 PGBD4Q96DM1 585 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 NECAB3Q96P71 396 aaPredicted RBP18.98■□□□□ 0.63
SSBP1-207ENST00000468267 RAB34Q9BZG1 259 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 CLDND1Q9NY35 253 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 LZTS1Q9Y250 596 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 STK24Q9Y6E0 443 aa18.98■□□□□ 0.63
SSBP1-207ENST00000468267 ARHGEF35A5YM69 484 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 MEIS3P2A8K0S8 358 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 INO80B-WBP1J3KQ70 363 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 TSPAN1O60635 241 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 OFD1O75665 1012 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 CYP11B2P19099 503 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 AXLP30530 894 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.63
SSBP1-207ENST00000468267 LTBRP36941 435 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 MBTD1Q05BQ5 628 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 CUL4AQ13619 759 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 IL17AQ16552 155 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 LARP1BQ659C4 914 aaKnown RBP18.97■□□□□ 0.63
SSBP1-207ENST00000468267 PADI6Q6TGC4 694 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 GLB1LQ6UWU2 654 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 EP400NLQ6ZTU2 488 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 MAEAQ7L5Y9 396 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 IGFLR1Q9H665 355 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 GPRC5CQ9NQ84 441 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 TLR9Q9NR96 1032 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 SPG21Q9NZD8 308 aa18.97■□□□□ 0.63
SSBP1-207ENST00000468267 H3BQ06 376 aaPredicted RBP18.96■□□□□ 0.63
SSBP1-207ENST00000468267 PPM1AP35813 382 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 PBX3P40426 434 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 ERVFC1P60507 584 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 NCBP1Q09161 790 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms