RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 PTPROQ16827 1216 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 PAN2Q504Q3 1202 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 PADI6Q6TGC4 694 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 MTRQ99707 1265 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 SUCLA2Q9P2R7 463 aaPredicted RBP16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 BRWD1Q9NSI6 2320 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 MYO7AQ13402 2215 aa16.41■□□□□ 0.22
PCOLCE-204ENST00000468214 GAS2O43903 313 aaKnown RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 SSBP05455 408 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 DARSP14868 501 aaKnown RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 CDC42EP1Q00587 391 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 GPM6BQ13491 265 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 RRAGBQ5VZM2 374 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 CCDC73Q6ZRK6 1079 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 SLC24A5Q71RS6 500 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 RHPN2Q8IUC4 686 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 CMTR2Q8IYT2 770 aaKnown RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 ZNF689Q96CS4 500 aaPredicted RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 GCOM2Q9BZD3 368 aaPredicted RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 RC3H2Q9HBD1 1191 aaKnown RBP16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 FAM13BQ9NYF5 915 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 STK17AQ9UEE5 414 aa16.4■□□□□ 0.22
PCOLCE-204ENST00000468214 RALGAPA2Q2PPJ7 1873 aa16.39■□□□□ 0.22
PCOLCE-204ENST00000468214 H3BNC9 293 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 PLA2G4BP0C869 781 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 STAT6P42226 847 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 TPRNQ4KMQ1 711 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 TJAP1Q5JTD0 557 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 PDILTQ8N807 584 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 MCPH1Q8NEM0 835 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 LRRC15Q8TF66 581 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 TCP11Q8WWU5 503 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 TMEM143Q96AN5 459 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 NLRP4Q96MN2 994 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 C11orf84Q9BUA3 381 aaPredicted RBP16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 PANK2Q9BZ23 570 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 XPNPEP1Q9NQW7 623 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 BLOC1S4Q9NUP1 217 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 TTC28Q96AY4 2481 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 TRANK1O15050 2925 aa16.39■□□□□ 0.21
PCOLCE-204ENST00000468214 A0A087WZ62 844 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 A0A087X0B3 334 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 C9IYK1 514 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 FGFR4P22455 802 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 BMPR1AP36894 532 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 GATMP50440 423 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 ZNF410Q86VK4 478 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 SYT2Q8N9I0 419 aaPredicted RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 PSPC1Q8WXF1 523 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 LARP4BQ92615 738 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 RAD54LQ92698 747 aa16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 MRPL38Q96DV4 380 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 FDXACB1Q9BRP7 624 aaPredicted RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 COL25A1Q9BXS0 654 aaPredicted RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 MRPL42Q9Y6G3 142 aaKnown RBP16.38■□□□□ 0.21
PCOLCE-204ENST00000468214 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 TBKBP1A7MCY6 615 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 CSDE1O75534 798 aaKnown RBP16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 RB1P06400 928 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 CYP11B2P19099 503 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 CMA1P23946 247 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 SLC12A3P55017 1021 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 MCM6Q14566 821 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 DSC3Q14574 896 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 SPOUT1Q5T280 376 aaKnown RBP16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 FAM102BQ5T8I3 360 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 RINT1Q6NUQ1 792 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 MAEAQ7L5Y9 396 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 CRIPAKQ8N1N5 446 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 RNF169Q8NCN4 708 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 RUSC1Q9BVN2 902 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 INO80BQ9C086 356 aaPredicted RBP16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 POLR3FQ9H1D9 316 aaPredicted RBP16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 TMEM161AQ9NX61 479 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 COL4A3BPQ9Y5P4 624 aa16.37■□□□□ 0.21
PCOLCE-204ENST00000468214 A0A1B0GVL5 298 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 A0A1W2PQ27 194 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 A0A1W2PQ64 194 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 A0A1W2PQD8 194 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 C5orf67F2Z3F1 127 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 PFKFB1P16118 471 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 AAK1Q2M2I8 961 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 GPBP1Q86WP2 473 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 KSR1Q8IVT5 923 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 FSIP1Q8NA03 581 aa16.36■□□□□ 0.21
PCOLCE-204ENST00000468214 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms