RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	ADAMTS10	Q9H324	1103 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	TUFT1	Q9NNX1	390 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	RGS18	Q9NS28	235 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	C1orf112	Q9NSG2	853 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	KIAA1468	Q9P260	1216 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	VAV3	Q9UKW4	847 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	WDR81	Q562E7	1941 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	EML1	O00423	815 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	ACTN4	O43707	911 aa	Known RBP	13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	MGEA5	O60502	916 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	DKC1	O60832	514 aa	Known RBP eCLIP	13.37	□□□□□ -0.27	4e-15	■■■■■ 36.5
CTNS-205	ENST00000467663	BMP1	P13497	986 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	NLRP11	P59045	1033 aa	Known RBP	13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	PSMC5	P62195	406 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	SPIRE1	Q08AE8	756 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	TBC1D8B	Q0IIM8	1120 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	EPHA7	Q15375	998 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	E2F4	Q16254	413 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	LONRF3	Q496Y0	759 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	USP49	Q70CQ1	688 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	SLC24A5	Q71RS6	500 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	LRRC71	Q8N4P6	559 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	SNX29	Q8TEQ0	813 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	DHX58	Q96C10	678 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	PPP1R16B	Q96T49	567 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	ADAM2	Q99965	735 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	GZF1	Q9H116	711 aa	Predicted RBP	13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	AKT3	Q9Y243	479 aa		13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	MYH9	P35579	1960 aa	Known RBP	13.37	□□□□□ -0.27
CTNS-205	ENST00000467663	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	IGKV6-21	A0A0C4DH24	114 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	SYCE3	A1L190	88 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663		C9IYK1	514 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	EIF4B	P23588	611 aa	Known RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	CTNNB1	P35222	781 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	GPC3	P51654	580 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	FAM189B	P81408	668 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	DSC3	Q14574	896 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	POSTN	Q15063	836 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	NT5DC1	Q5TFE4	455 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	PDILT	Q8N807	584 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	BANK1	Q8NDB2	785 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	ADAMTS19	Q8TE59	1207 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	CCDC47	Q96A33	483 aa	Known RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	GSDMA	Q96QA5	445 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	MMTAG2	Q9BU76	263 aa	Known RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	PLVAP	Q9BX97	442 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	LMAN2L	Q9H0V9	348 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	KBTBD4	Q9NVX7	518 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	RNF216	Q9NWF9	866 aa	Predicted RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	SERTAD1	Q9UHV2	236 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	TTC28	Q96AY4	2481 aa		13.36	□□□□□ -0.27
CTNS-205	ENST00000467663	DENND3	A2RUS2	1198 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	TMEM150B	A6NC51	233 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	POTEM	A6NI47	508 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	MAF	O75444	373 aa	Predicted RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	XRCC6	P12956	609 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	DARS	P14868	501 aa	Known RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	CCT6A	P40227	531 aa	Known RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	QARS	P47897	775 aa	Known RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	KCNQ1	P51787	676 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	CDC42EP1	Q00587	391 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	KARS	Q15046	597 aa	Known RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	CAMK4	Q16566	473 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	MTERF2	Q49AM1	385 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	TMEM119	Q4V9L6	283 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	TIGD5	Q53EQ6	642 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	CNNM4	Q6P4Q7	775 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	ANO5	Q75V66	913 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	SPATA20	Q8TB22	786 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	P2RX5	Q93086	422 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	TSPY26P	Q9H489	355 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	ELAC1	Q9H777	363 aa	Known RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	ANO10	Q9NW15	660 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	RMND1	Q9NWS8	449 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	LRFN2	Q9ULH4	789 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	PCDHB7	Q9Y5E2	793 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	MRPL42	Q9Y6G3	142 aa	Known RBP	13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	EVPL	Q92817	2033 aa		13.35	□□□□□ -0.27
CTNS-205	ENST00000467663	TNFRSF10A	O00220	468 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	GRM6	O15303	877 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	P4HB	P07237	508 aa	Known RBP	13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	PLCG1	P19174	1290 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	GATM	P50440	423 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	DRP2	Q13474	957 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	STX1A	Q16623	288 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	NAALADL2	Q58DX5	795 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	NCAPH2	Q6IBW4	605 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	SV2B	Q7L1I2	683 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	LARP4B	Q92615	738 aa	Known RBP	13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	SMARCE1	Q969G3	411 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	PAGE5	Q96GU1	130 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	UHRF1	Q96T88	793 aa	Predicted RBP	13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	HSD17B14	Q9BPX1	270 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	SH2D3A	Q9BRG2	576 aa		13.34	□□□□□ -0.27
CTNS-205	ENST00000467663	FUCA2	Q9BTY2	467 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms