RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ZC3H11AO75152 810 aaKnown RBP eCLIP13.75□□□□□ -0.213e-13■■□□□ 14.2
UBR4-211ENST00000467272 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
UBR4-211ENST00000467272 SFNP31947 248 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 AFF1P51825 1210 aaKnown RBP13.75□□□□□ -0.21
UBR4-211ENST00000467272 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 AGMOQ6ZNB7 445 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
UBR4-211ENST00000467272 CABP7Q86V35 215 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 PPFIBP1Q86W92 1011 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 DTWD2Q8NBA8 298 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 RDM1Q8NG50 284 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 KCNB2Q92953 911 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 UNC45AQ9H3U1 944 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 FAM105AQ9NUU6 356 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 STK39Q9UEW8 545 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 ZFHX4Q86UP3 3567 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 CYP3A7-CYP3A51PA0A087WV96 503 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 A0A087WZ62 844 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 INPPL1O15357 1258 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 MAFO75444 373 aaPredicted RBP13.74□□□□□ -0.21
UBR4-211ENST00000467272 DDHD2O94830 711 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 CYP3A7P24462 503 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 ID4P47928 161 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 USP11P51784 963 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 JAK3P52333 1124 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 TBC1D8BQ0IIM8 1120 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
UBR4-211ENST00000467272 LETM2Q2VYF4 491 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 POTEGQ6S5H5 508 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 GLB1LQ6UWU2 654 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 ZNF410Q86VK4 478 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 MBOAT7Q96N66 472 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
UBR4-211ENST00000467272 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
UBR4-211ENST00000467272 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 DLGAP2Q9P1A6 1054 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 IGSF9Q9P2J2 1179 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 WNT16Q9UBV4 365 aa13.74□□□□□ -0.21
UBR4-211ENST00000467272 MYH9P35579 1960 aaKnown RBP13.73□□□□□ -0.21
UBR4-211ENST00000467272 KRBA1A5PL33 1030 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 TMEM150BA6NC51 233 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 C1RP00736 705 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 SKIP12755 728 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBR4-211ENST00000467272 GNA11P29992 359 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
UBR4-211ENST00000467272 RAB27AP51159 221 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 Q4G0T1 1027 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 XKR3Q5GH77 459 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 UBXN11Q5T124 520 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 CCDC149Q6ZUS6 474 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 ANO5Q75V66 913 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 GJA10Q969M2 543 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 ACSF2Q96CM8 615 aaPredicted RBP13.73□□□□□ -0.21
UBR4-211ENST00000467272 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 MFSD1Q9H3U5 465 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 SAMM50Q9Y512 469 aa13.73□□□□□ -0.21
UBR4-211ENST00000467272 WDR81Q562E7 1941 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 M0R2N6 131 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 NARSO43776 548 aaKnown RBP13.72□□□□□ -0.21
UBR4-211ENST00000467272 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 KIAA0319Q5VV43 1072 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 SIX5Q8N196 739 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 FLCNQ8NFG4 579 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 CCDC12Q8WUD4 166 aaPredicted RBP13.72□□□□□ -0.21
UBR4-211ENST00000467272 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
UBR4-211ENST00000467272 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 TMEM175Q9BSA9 504 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 SEMA4AQ9H3S1 761 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 RXFP1Q9HBX9 757 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 WDR6Q9NNW5 1121 aaKnown RBP13.72□□□□□ -0.21
UBR4-211ENST00000467272 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 MARCH5Q9NX47 278 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 PCDHB2Q9Y5E7 798 aa13.72□□□□□ -0.21
UBR4-211ENST00000467272 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 GAS7O60861 476 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 SOD2P04179 222 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 EVCP57679 992 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 NPY5RQ15761 445 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 LONRF3Q496Y0 759 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 LRCH2Q5VUJ6 765 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.21
UBR4-211ENST00000467272 TAS1R1Q7RTX1 841 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 SLC44A3Q8N4M1 653 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 EMILIN2Q9BXX0 1053 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.21
UBR4-211ENST00000467272 MINDY3Q9H8M7 445 aa13.71□□□□□ -0.21
UBR4-211ENST00000467272 SUCLA2Q9P2R7 463 aaPredicted RBP13.71□□□□□ -0.21
UBR4-211ENST00000467272 PIN4Q9Y237 131 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms