RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ZNF746Q6NUN9 644 aaPredicted RBP12.43□□□□□ -0.42
HPS1-208ENST00000467246 XRRA1Q6P2D8 792 aa12.43□□□□□ -0.42
HPS1-208ENST00000467246 INTS8Q75QN2 995 aaKnown RBP12.43□□□□□ -0.42
HPS1-208ENST00000467246 XXYLT1Q8NBI6 393 aa12.43□□□□□ -0.42
HPS1-208ENST00000467246 TEX13BQ9BXU2 312 aa12.43□□□□□ -0.42
HPS1-208ENST00000467246 RBM12Q9NTZ6 932 aaKnown RBP12.43□□□□□ -0.42
HPS1-208ENST00000467246 TSKSQ9UJT2 592 aa12.43□□□□□ -0.42
HPS1-208ENST00000467246 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
HPS1-208ENST00000467246 CCDC66A2RUB6 948 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 ANKRD63C9JTQ0 380 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 TRIM66O15016 1216 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 NPTX2P47972 431 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 NCKAP1LP55160 1127 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 RNASE9P60153 205 aaKnown RBP12.42□□□□□ -0.42
HPS1-208ENST00000467246 SWSAP1Q6NVH7 229 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 CCNI2Q6ZMN8 369 aaPredicted RBP12.42□□□□□ -0.42
HPS1-208ENST00000467246 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 SLC30A5Q8TAD4 765 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 BSNDQ8WZ55 320 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 ST6GALNAC4Q9H4F1 302 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
HPS1-208ENST00000467246 TMCO5BA8MYB1 307 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 FOXN3O00409 490 aaPredicted RBP12.42□□□□□ -0.42
HPS1-208ENST00000467246 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
HPS1-208ENST00000467246 STBD1O95210 358 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 H2AFZP0C0S5 128 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 ADSSP30520 456 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 CFAP221Q4G0U5 840 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 H2AFVQ71UI9 128 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 TMEM161BQ8NDZ6 487 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
HPS1-208ENST00000467246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.42□□□□□ -0.42
HPS1-208ENST00000467246 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 MAFGO15525 162 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 ADRB2P07550 413 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 MCM3P25205 808 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 ANXA13P27216 316 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 LRRC57Q8N9N7 239 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 TMEM174Q8WUU8 243 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 SENP7Q9BQF6 1050 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 SYT11Q9BT88 431 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 TIPINQ9BVW5 301 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 UBE2TQ9NPD8 197 aaPredicted RBP12.41□□□□□ -0.42
HPS1-208ENST00000467246 LCMT1Q9UIC8 334 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 USP2O75604 605 aaPredicted RBP12.41□□□□□ -0.42
HPS1-208ENST00000467246 GALCP54803 685 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 FSTL1Q12841 308 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 CBWD2Q8IUF1 395 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 ARHGEF19Q8IW93 802 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 CCDC60Q8IWA6 550 aaPredicted RBP12.41□□□□□ -0.42
HPS1-208ENST00000467246 RDM1Q8NG50 284 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 JPH1Q9HDC5 661 aaPredicted RBP12.41□□□□□ -0.42
HPS1-208ENST00000467246 HOXC10Q9NYD6 342 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 PFASO15067 1338 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 DENND3A2RUS2 1198 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 CNGA1P29973 690 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
HPS1-208ENST00000467246 SP2Q02086 613 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 DMP1Q13316 513 aaPredicted RBP12.41□□□□□ -0.42
HPS1-208ENST00000467246 CCDC70Q6NSX1 233 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 PALB2Q86YC2 1186 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 GPC2Q8N158 579 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.41□□□□□ -0.42
HPS1-208ENST00000467246 TPCN2Q8NHX9 752 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
HPS1-208ENST00000467246 SMTNP53814 917 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 ACTR2P61160 394 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 EPC2Q52LR7 807 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
HPS1-208ENST00000467246 OTUD6AQ7L8S5 288 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 KMT5AQ9NQR1 393 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 TAS2R14Q9NYV8 317 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 ADGRA3Q8IWK6 1321 aa12.4□□□□□ -0.42
HPS1-208ENST00000467246 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 KCNK3O14649 394 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 PSAPP07602 524 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 CNTN2Q02246 1040 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 VGLL4Q14135 290 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 SUPT20HL1Q3ZLR7 823 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 MAP9Q49MG5 647 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 NOL9Q5SY16 702 aaKnown RBP12.4□□□□□ -0.43
HPS1-208ENST00000467246 TREML2Q5T2D2 321 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 MAP4K3Q8IVH8 894 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 KAT5Q92993 513 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 CCDC127Q96BQ5 260 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 IWS1Q96ST2 819 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.43
HPS1-208ENST00000467246 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.43
HPS1-208ENST00000467246 RNF14Q9UBS8 474 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms