RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MAGEC2Q9UBF1 373 aaPredicted RBP5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 ZKSCAN5Q9Y2L8 839 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 PPP1R12AO14974 1030 aaPredicted RBP5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 OPHN1O60890 802 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 PPFIA2O75334 1257 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 RPS6KA4O75676 772 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 GNAT2P19087 354 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 CREB3L3Q68CJ9 461 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 PCSK4Q6UW60 755 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 APBB1IPQ7Z5R6 666 aaPredicted RBP5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 KIF18BQ86Y91 864 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 SYNPOQ8N3V7 929 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 MB21D1Q8N884 522 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 SREK1Q8WXA9 508 aaKnown RBP5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 ST8SIA2Q92186 375 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 ZG16BQ96DA0 208 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 HIST1H2AHQ96KK5 128 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 AGAP2Q99490 1192 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 HIST1H2AJQ99878 128 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 NOL10Q9BSC4 688 aaKnown RBP5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 TTPALQ9BTX7 342 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 POFUT1Q9H488 388 aa5.82□□□□□ -1.48
CHMP2B-202ENST00000466696 NRP1O14786 923 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 FOXN1O15353 648 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 FAM20BO75063 409 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 ASMTLO95671 621 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 KRT4P19013 534 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 NANOS3P60323 173 aaKnown RBP5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 DCAF17Q5H9S7 520 aaPredicted RBP5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 NAIF1Q69YI7 327 aaPredicted RBP5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 LAIR1Q6GTX8 287 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 DNAJC10Q8IXB1 793 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 ZNF276Q8N554 614 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 RTF1Q92541 710 aaKnown RBP5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 LENG9Q96B70 501 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 PGBD4Q96DM1 585 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 TMEM260Q9NX78 707 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 TRPS1Q9UHF7 1281 aa5.81□□□□□ -1.48
CHMP2B-202ENST00000466696 A0A0A6YYK5 440 aaPredicted RBP5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 GAS7O60861 476 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 PPFIA4O75335 1185 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 ATP2A2P16615 1042 aaKnown RBP5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 CD40P25942 277 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 LRRC32Q14392 662 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 C1QL3Q5VWW1 255 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 UNQ6494/PRO21346Q6UXR6 183 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 Q6ZPA2 131 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 MRGPREQ86SM8 312 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 ZNF575Q86XF7 245 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 PASD1Q8IV76 773 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 RPUSD2Q8IZ73 545 aaKnown RBP5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 SYNE4Q8N205 404 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 SOX7Q9BT81 388 aa5.8□□□□□ -1.48
CHMP2B-202ENST00000466696 F2P00734 622 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 GAAP10253 952 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 UNC5BQ8IZJ1 945 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 EFHBQ8N7U6 833 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 PPP1R14CQ8TAE6 165 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 ZSWIM4Q9H7M6 989 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 ZMAT4Q9H898 229 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 KANSL2Q9H9L4 492 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 USP36Q9P275 1121 aaKnown RBP5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 FZD1Q9UP38 647 aa5.79□□□□□ -1.48
CHMP2B-202ENST00000466696 MYPNQ86TC9 1320 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 HOXA3O43365 443 aaPredicted RBP5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 RECQL4O94761 1208 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 RHOUQ7L0Q8 258 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 CDYL2Q8N8U2 506 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 CRAMP1Q96RY5 1269 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 ING3Q9NXR8 418 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 H2AFY2Q9P0M6 372 aaPredicted RBP5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 PCDHB6Q9Y5E3 794 aa5.78□□□□□ -1.48
CHMP2B-202ENST00000466696 ST20-MTHFSA0A0A6YYL1 179 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 GRXCR1A8MXD5 290 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 STC2O76061 302 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 ALDH1A2O94788 518 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 RHOBTB3O94955 611 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 PCDH8O95206 1070 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 ITGB1P05556 798 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 NEK4P51957 841 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 TCEA2Q15560 299 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 METTL24Q5JXM2 366 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 LY6G5CQ5SRR4 150 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 ESPNLQ6ZVH7 1005 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 PDCD2LQ9BRP1 358 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 ENKD1Q9H0I2 346 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 EPC1Q9H2F5 836 aa5.77□□□□□ -1.49
CHMP2B-202ENST00000466696 ELL2O00472 640 aaPredicted RBP5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 TRIM24O15164 1050 aa5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 GCP02774 474 aa5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 HK1P19367 917 aa5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 POU3F2P20265 443 aaPredicted RBP5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 DSG1Q02413 1049 aa5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 FSTL1Q12841 308 aa5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 PTPAQ15257 358 aa5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 GLB1L3Q8NCI6 653 aaPredicted RBP5.76□□□□□ -1.49
CHMP2B-202ENST00000466696 PIK3C3Q8NEB9 887 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms