RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 MYLK4Q86YV6 388 aaPredicted RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 TMEM192Q8IY95 271 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 FANCBQ8NB91 859 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 DRAXINQ8NBI3 349 aaPredicted RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 DBF4BQ8NFT6 615 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 CCDC26Q8TAB7 109 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 EDAQ92838 391 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 BRF1Q92994 677 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 VMP1Q96GC9 406 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 CDHR1Q96JP9 859 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 CRACR2AQ9BSW2 395 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 AMNQ9BXJ7 453 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 COL20A1Q9P218 1284 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 GTF2IRD1Q9UHL9 959 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 FAM50BQ9Y247 325 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 ATP8A1Q9Y2Q0 1164 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 MORC2Q9Y6X9 1032 aaPredicted RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 SPTBN4Q9H254 2564 aa8.09□□□□□ -1.12
RPUSD3-212ENST00000466141 FRMPD4Q14CM0 1322 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 FAM25EA8MYX2 175 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 STXBP3O00186 592 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 GRM6O15303 877 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 EFCAB14O75071 495 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 KIAA0754O94854 1291 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 AMHP03971 560 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 SLFN14P0C7P3 912 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 CDC27P30260 824 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 DNAJA1P31689 397 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 PIK3CAP42336 1068 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 PSEN2P49810 448 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 NUCB2P80303 420 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 ARHGAP1Q07960 439 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 SFSWAPQ12872 951 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 RBBP5Q15291 538 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 FXNQ16595 210 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 SLC5A9Q2M3M2 681 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 CCDC62Q6P9F0 684 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 TRIM67Q6ZTA4 783 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 SEPT14Q6ZU15 432 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 CMTR1Q8N1G2 835 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 C7orf31Q8N865 590 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 BICD1Q96G01 975 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 RSRC1Q96IZ7 334 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 YME1L1Q96TA2 773 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 IGFLR1Q9H665 355 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 C6orf203Q9P0P8 240 aaPredicted RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 LZTS1Q9Y250 596 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 MRPL11Q9Y3B7 192 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 PCDHA1Q9Y5I3 950 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 CYP46A1Q9Y6A2 500 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 NLRC5Q86WI3 1866 aa8.08□□□□□ -1.12
RPUSD3-212ENST00000466141 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 SORBS3O60504 671 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 GH1P01241 217 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 CTNNB1P35222 781 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 THPOP40225 353 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 PRPHP41219 470 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 METAP2P50579 478 aaKnown RBP eCLIP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 SMAD4Q13485 552 aaKnown RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 BECN1Q14457 450 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 RABEP1Q15276 862 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 DBN1Q16643 649 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 KIAA0753Q2KHM9 967 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 ODR4Q5SWX8 454 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 HHATQ5VTY9 493 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 BMP8AQ7Z5Y6 402 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 CCDC65Q8IXS2 484 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 SAMD14Q8IZD0 417 aaPredicted RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 FBXL6Q8N531 539 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 PAF1Q8N7H5 531 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 KIAA1958Q8N8K9 716 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 SYTL5Q8TDW5 730 aaPredicted RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 TBC1D5Q92609 795 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 ATOH1Q92858 354 aaPredicted RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 CENPTQ96BT3 561 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 RRP36Q96EU6 259 aaKnown RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 FRMD6Q96NE9 622 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 BAG1Q99933 345 aaPredicted RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 ALG2Q9H553 416 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 CASS4Q9NQ75 786 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 QPCTLQ9NXS2 382 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 MAFBQ9Y5Q3 323 aaPredicted RBP8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 COL4A6Q14031 1691 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 CACNA1BQ00975 2339 aa8.07□□□□□ -1.12
RPUSD3-212ENST00000466141 PLXNA3P51805 1871 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 CACNA1GO43497 2377 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 hCG_1642624A0A1W2PR95 340 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 RSPH10B2B2RC85 870 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 H0Y858 1186 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 ERLIN1O75477 346 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 RGS20O76081 388 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 MMEP08473 750 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 CTSHP09668 335 aa8.06□□□□□ -1.12
RPUSD3-212ENST00000466141 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 502.3 ms