RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 WDR78Q5VTH9 848 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 IRGCQ6NXR0 463 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 C8orf74Q6P047 294 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 EMBQ6PCB8 327 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CABP7Q86V35 215 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 MYO1HQ8N1T3 1032 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 DQX1Q8TE96 717 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 GLMNQ92990 594 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PPP2R3CQ969Q6 453 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 FERMT2Q96AC1 680 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 NUDCD1Q96RS6 583 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 NUP85Q9BW27 656 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 TPK1Q9H3S4 243 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 AAASQ9NRG9 546 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 METTL5Q9NRN9 209 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PGPEP1Q9NXJ5 209 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 HESX1Q9UBX0 185 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CNOT8Q9UFF9 292 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 RCOR1Q9UKL0 485 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC42Q9Y546 428 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SLC4A7Q9Y6M7 1214 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 WASF2Q9Y6W5 498 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 IRS2Q9Y4H2 1338 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KLRG2A4D1S0 409 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 DCDC2CA8MYV0 355 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 F8W031 263 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 NVLO15381 856 aaKnown RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 TEX28O15482 410 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MARCH6O60337 910 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KDM1AO60341 852 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 DDHD2O94830 711 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CHGBP05060 677 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 POLR3DP05423 398 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 COL6A2P12110 1019 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ACADSP16219 412 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 DPEP1P16444 411 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 FSHRP23945 695 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 TM4SF1P30408 202 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MAGOHP61326 146 aaKnown RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 PPP2R2AP63151 447 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 COG7P83436 770 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ATP8B2P98198 1209 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 PDE1BQ01064 536 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 HLTFQ14527 1009 aaKnown RBP eCLIP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ZFYVE27Q5T4F4 411 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 PPP1R26Q5T8A7 1209 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KLC3Q6P597 504 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 BLOC1S2Q6QNY1 142 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 SESTD1Q86VW0 696 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 TREML1Q86YW5 311 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KSR1Q8IVT5 923 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MEIOBQ8N635 442 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 SUPT20HQ8NEM7 779 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 GABPB2Q8TAK5 448 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MAGOHBQ96A72 148 aaKnown RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 IFT43Q96FT9 208 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 DHTKD1Q96HY7 919 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 IFT74Q96LB3 600 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 NUP88Q99567 741 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CENPKQ9BS16 269 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 NAA15Q9BXJ9 866 aaKnown RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CCSER1Q9C0I3 900 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 OSBPL3Q9H4L5 887 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 SAMSN1Q9NSI8 373 aaKnown RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 BTBD7Q9P203 1132 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 USP20Q9Y2K6 914 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 HRH3Q9Y5N1 445 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 COMMD3-BMI1R4GMX3 469 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 LINC00854A0A1B0GVQ3 168 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ORC4O43929 436 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ADCY3O60266 1144 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 OPHN1O60890 802 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 FKTNO75072 461 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 VDRP11473 427 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 SKIP12755 728 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 PORP16435 677 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 GNAZP19086 355 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CALB2P22676 271 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MZF1P28698 734 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MARCKSP29966 332 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CDC27P30260 824 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CDC25AP30304 524 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 TCF7P36402 384 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ARFIP2P53365 341 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 RTP1P59025 263 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ERVK-24P63145 666 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 GPSM2P81274 684 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 RALGDSQ12967 914 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 PRKG1Q13976 671 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KIF22Q14807 665 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 SAFBQ15424 915 aaKnown RBP eCLIP3.88□□□□□ -1.79
COL8A1-205ENST00000463753 USH1GQ495M9 461 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 FAM209AQ5JX71 171 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KAZNQ674X7 775 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ANO5Q75V66 913 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 C11orf74Q86VG3 221 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CNTROBQ8N137 903 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 RETREG2Q8NC44 543 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms