RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
ATG4B-213ENST00000460211 TMEM192Q8IY95 271 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 ABI1Q8IZP0 508 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 CRIPAKQ8N1N5 446 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-213ENST00000460211 CDK5RAP3Q96JB5 506 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 AK8Q96MA6 479 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
ATG4B-213ENST00000460211 POLR3FQ9H1D9 316 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-213ENST00000460211 PIN4Q9Y237 131 aaKnown RBP16.58■□□□□ 0.24
ATG4B-213ENST00000460211 A0A0U1RQF3 1178 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 ERLIN2O94905 339 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 EOMESO95936 686 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 RB1P06400 928 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 PTENP60484 403 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 SF3A1Q15459 793 aaKnown RBP16.57■□□□□ 0.24
ATG4B-213ENST00000460211 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
ATG4B-213ENST00000460211 LEXMQ3ZCV2 418 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 EPC2Q52LR7 807 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 FAM102BQ5T8I3 360 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 MAEAQ7L5Y9 396 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 ECHDC2Q86YB7 292 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 FAM178BQ8IXR5 827 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 GJD3Q8N144 294 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 BHMT2Q9H2M3 363 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 RC3H2Q9HBD1 1191 aaKnown RBP16.57■□□□□ 0.24
ATG4B-213ENST00000460211 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
ATG4B-213ENST00000460211 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 PP2D1A8MPX8 630 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 SLC26A4O43511 780 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 EYA4O95677 639 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 GLRA2P23416 452 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 CDC25AP30304 524 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 CTNNB1P35222 781 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 BMPR1AP36894 532 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 UBA7P41226 1012 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 RESTQ13127 1097 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 PPP2R5AQ15172 486 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 ECM1Q16610 540 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 PTPROQ16827 1216 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 PAN2Q504Q3 1202 aaKnown RBP16.56■□□□□ 0.24
ATG4B-213ENST00000460211 SPOUT1Q5T280 376 aaKnown RBP16.56■□□□□ 0.24
ATG4B-213ENST00000460211 PTCRAQ6ISU1 281 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-213ENST00000460211 EP400NLQ6ZTU2 488 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 RNF169Q8NCN4 708 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 ASAP3Q8TDY4 903 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 RSPH1Q8WYR4 309 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
ATG4B-213ENST00000460211 TRAIPQ9BWF2 469 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 NFKBIZQ9BYH8 718 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 AGPAT5Q9NUQ2 364 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 LOXHD1Q8IVV2 1947 aa16.56■□□□□ 0.24
ATG4B-213ENST00000460211 H3BQ06 376 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-213ENST00000460211 AXLP30530 894 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
ATG4B-213ENST00000460211 RAB27AP51159 221 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 GPM6BQ13491 265 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 CAPSQ13938 189 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 ALYREFQ86V81 257 aaKnown RBP16.55■□□□□ 0.24
ATG4B-213ENST00000460211 IFNLR1Q8IU57 520 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-213ENST00000460211 ZBTB8OSQ8IWT0 167 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 KIFAP3Q92845 792 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 PGBD4Q96DM1 585 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 IFT74Q96LB3 600 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 C11orf84Q9BUA3 381 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-213ENST00000460211 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 TMEM117Q9H0C3 514 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 AAASQ9NRG9 546 aa16.55■□□□□ 0.24
ATG4B-213ENST00000460211 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 H3BNC9 293 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 FGFR1P11362 822 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 NAALADL2Q58DX5 795 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 HYIQ5T013 277 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 CABP7Q86V35 215 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 RASSF8Q8NHQ8 419 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 MMTAG2Q9BU76 263 aaKnown RBP16.54■□□□□ 0.24
ATG4B-213ENST00000460211 C2orf40Q9H1Z8 148 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 MINDY3Q9H8M7 445 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 FAM105AQ9NUU6 356 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 MRPL42Q9Y6G3 142 aaKnown RBP16.54■□□□□ 0.24
ATG4B-213ENST00000460211 MUC6Q6W4X9 2439 aa16.54■□□□□ 0.24
ATG4B-213ENST00000460211 COL4A6Q14031 1691 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 NLRC5Q86WI3 1866 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 PRR33A8MZF0 331 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 E9PMD0 336 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 C5orf67F2Z3F1 127 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 ZNF623O75123 536 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
ATG4B-213ENST00000460211 NOTUMQ6P988 496 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 CNNM3Q8NE01 707 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 DEPTORQ8TB45 409 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 MRPL38Q96DV4 380 aaKnown RBP16.53■□□□□ 0.24
ATG4B-213ENST00000460211 CCDC51Q96ER9 411 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-213ENST00000460211 TIPINQ9BVW5 301 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 KCNG1Q9UIX4 513 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms