RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ZNF473Q8WTR7 871 aaKnown RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 TMEM106CQ9BVX2 250 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.346e-8■■■■■ 50.5
CMTM3-203ENST00000460097 CEP83Q9Y592 693 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 SPDYE3A6NKU9 549 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 NR3C2P08235 984 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 NR1D1P20393 614 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 KIF11P52732 1056 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 PDCLQ13371 301 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 NEDD9Q14511 834 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 SYN2Q92777 582 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 ATP6V1G3Q96LB4 118 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 PDCD2LQ9BRP1 358 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 NUCKS1Q9H1E3 243 aaKnown RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 TFR2Q9UP52 801 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 RBBP6Q7Z6E9 1792 aaKnown RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 LCTP09848 1927 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 ZNF233A6NK53 670 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 CCDC85CA6NKD9 419 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 H0YHG0 523 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 FGFR1OPO95684 399 aaKnown RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 ZNF865P0CJ78 1059 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 HSPA9P38646 679 aaKnown RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 STXBP2Q15833 593 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 ASTE1Q2TB18 679 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 PIK3AP1Q6ZUJ8 805 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 EEPD1Q7L9B9 569 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 NLRP14Q86W24 1093 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 DAGLBQ8NCG7 672 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 NOX5Q96PH1 765 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 NOC4LQ9BVI4 516 aaKnown RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 PAK6Q9NQU5 681 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-203ENST00000460097 ARHGAP20Q9P2F6 1191 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
CMTM3-203ENST00000460097 SEPT4O43236 478 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 FOSP01100 380 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-203ENST00000460097 GJB1P08034 283 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 MCM7P33993 719 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
CMTM3-203ENST00000460097 PGM5Q15124 567 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 MYCBPAPQ8TBZ2 947 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 TLR10Q9BXR5 811 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 KATNBL1Q9H079 304 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 VTA1Q9NP79 307 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 SAMM50Q9Y512 469 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 MYBP10242 640 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 MYCLP12524 364 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-203ENST00000460097 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
CMTM3-203ENST00000460097 CYP27A1Q02318 531 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 AP3B2Q13367 1082 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 VSIG10LQ86VR7 867 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 FBXO16Q8IX29 292 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-203ENST00000460097 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 DEFB118Q96PH6 123 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 CCT8L2Q96SF2 557 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 LUC7LQ9NQ29 371 aaKnown RBP17.15■□□□□ 0.34
CMTM3-203ENST00000460097 PLCB1Q9NQ66 1216 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 PCDHA4Q9UN74 947 aa17.15■□□□□ 0.34
CMTM3-203ENST00000460097 MCM3APO60318 1980 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 GOLGA6L7A0A1B0GV03 622 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 M0R2N6 131 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 PES1O00541 588 aaKnown RBP17.14■□□□□ 0.33
CMTM3-203ENST00000460097 MSCO60682 206 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 PAEPP09466 180 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 AKR1A1P14550 325 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 CCND2P30279 289 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
CMTM3-203ENST00000460097 ITGB3BPQ13352 177 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-203ENST00000460097 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 BLIDQ8IZY5 108 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 REXO1Q8N1G1 1221 aaKnown RBP17.14■□□□□ 0.33
CMTM3-203ENST00000460097 GPATCH11Q8N954 259 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 KLC4Q9NSK0 619 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
CMTM3-203ENST00000460097 MCM8Q9UJA3 840 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 MAPK8IP1Q9UQF2 711 aa17.14■□□□□ 0.33
CMTM3-203ENST00000460097 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 C5orf60A6NFR6 353 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 MOCS3O95396 460 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 UBA7P41226 1012 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 MAGEA1P43355 309 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 AMPD3Q01432 767 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 IFFO1Q0D2I5 559 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 ORC2Q13416 577 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-203ENST00000460097 BIRC3Q13489 604 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 KLHDC7AQ5VTJ3 777 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 CENPPQ6IPU0 288 aa17.13■□□□□ 0.33
CMTM3-203ENST00000460097 TAPT1Q6NXT6 567 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms