RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 EPCAMP16422 314 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 MTERF2Q49AM1 385 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 ATAT1Q5SQI0 421 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 RARS2Q5T160 578 aaKnown RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 CENPQQ7L2Z9 268 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 MIER3Q7Z3K6 550 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 PPFIBP1Q86W92 1011 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 TMEM105Q8N8V8 129 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 ETNPPLQ8TBG4 499 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 JPH2Q9BR39 696 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 FDXACB1Q9BRP7 624 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 SLC26A6Q9BXS9 759 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 PIN4Q9Y237 131 aaKnown RBP11.72□□□□□ -0.53
HDLBP-227ENST00000458564 FAM186AA6NE01 2351 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 PLXNA3P51805 1871 aa11.72□□□□□ -0.53
HDLBP-227ENST00000458564 TMEM150BA6NC51 233 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 MEIS3P2A8K0S8 358 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 H0Y858 1186 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 OFD1O75665 1012 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 TDP2O95551 362 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 ASGR2P07307 311 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.53
HDLBP-227ENST00000458564 NBL1P41271 181 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 CLCN5P51795 746 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 NLRP5P59047 1200 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-227ENST00000458564 ANO5Q75V66 913 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 RHPN2Q8IUC4 686 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 C12orf76Q8N812 135 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-227ENST00000458564 DAGLBQ8NCG7 672 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 AUTS2Q8WXX7 1259 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 LPPQ93052 612 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 GJA10Q969M2 543 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 VN1R3Q9BXE9 311 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 SMOC2Q9H3U7 446 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 AGPAT5Q9NUQ2 364 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-227ENST00000458564 DBR1Q9UK59 544 aaKnown RBP11.71□□□□□ -0.53
HDLBP-227ENST00000458564 PPME1Q9Y570 386 aa11.71□□□□□ -0.53
HDLBP-227ENST00000458564 MYO10Q9HD67 2058 aa11.71□□□□□ -0.54
HDLBP-227ENST00000458564 GVINP1Q7Z2Y8 2422 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 SPTBN4Q9H254 2564 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 B4GALT3O60512 393 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 WEE2P0C1S8 567 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 PSMA5P28066 241 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 CA8P35219 290 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 SLC11A1P49279 550 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 PSMC5P62195 406 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 RNASELQ05823 741 aaKnown RBP11.7□□□□□ -0.54
HDLBP-227ENST00000458564 NPY5RQ15761 445 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 GALNT17Q6IS24 598 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 C15orf39Q6ZRI6 1047 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 CCDC149Q6ZUS6 474 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 CATSPER4Q7RTX7 472 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
HDLBP-227ENST00000458564 GPR149Q86SP6 731 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 CABP7Q86V35 215 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 TRIM22Q8IYM9 498 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 TMEM87AQ8NBN3 555 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 PGBD4Q96DM1 585 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 NLRP4Q96MN2 994 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 NCOA5Q9HCD5 579 aaKnown RBP11.7□□□□□ -0.54
HDLBP-227ENST00000458564 CYP26B1Q9NR63 512 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 DNAJB4Q9UDY4 337 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 LIMD1Q9UGP4 676 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 INPP5FQ9Y2H2 1132 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
HDLBP-227ENST00000458564 CNTNAP2Q9UHC6 1331 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 PRR23AA6NEV1 266 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 LILRB3O75022 631 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 CLCN4P51793 760 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 PPP2R5CQ13362 524 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 CWF19L1Q69YN2 538 aaKnown RBP11.69□□□□□ -0.54
HDLBP-227ENST00000458564 KANK3Q6NY19 840 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 TMC5Q6UXY8 1006 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 AGMOQ6ZNB7 445 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 OTOP3Q7RTS5 596 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 ASCL5Q7RTU5 278 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 ZNF280BQ86YH2 543 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 EXOC8Q8IYI6 725 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 BLIDQ8IZY5 108 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 CMASQ8NFW8 434 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-227ENST00000458564 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 SLC7A3Q8WY07 619 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 ACSF2Q96CM8 615 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-227ENST00000458564 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 TMEM175Q9BSA9 504 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 EMILIN2Q9BXX0 1053 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 RHOBTB2Q9BYZ6 727 aa11.69□□□□□ -0.54
HDLBP-227ENST00000458564 DHX33Q9H6R0 707 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms