RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 LINC00271P0C7V0 271 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 AXLP30530 894 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 LONP1P36776 959 aaKnown RBP18.02■□□□□ 0.48
SMPD4-214ENST00000455548 GATMP50440 423 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 PTPROQ16827 1216 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 NAALADL2Q58DX5 795 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 ZNF598Q86UK7 904 aaKnown RBP18.02■□□□□ 0.48
SMPD4-214ENST00000455548 ABI1Q8IZP0 508 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 RNF169Q8NCN4 708 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 SLC17A8Q8NDX2 589 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 PPM1EQ8WY54 764 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 RSPH1Q8WYR4 309 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 KIFAP3Q92845 792 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 GPRC5CQ9NQ84 441 aa18.02■□□□□ 0.48
SMPD4-214ENST00000455548 ZNF623O75123 536 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 FGFR1P11362 822 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 UBA7P41226 1012 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 PPP2R5AQ15172 486 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 ZRSR1Q15695 479 aaKnown RBP18.01■□□□□ 0.47
SMPD4-214ENST00000455548 CCDC85BQ15834 202 aaPredicted RBP18.01■□□□□ 0.47
SMPD4-214ENST00000455548 CABP7Q86V35 215 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 ZBTB8OSQ8IWT0 167 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 P2RX5Q93086 422 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 MRPL38Q96DV4 380 aaKnown RBP18.01■□□□□ 0.47
SMPD4-214ENST00000455548 CCDC51Q96ER9 411 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 C2orf40Q9H1Z8 148 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 AAASQ9NRG9 546 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 FAM105AQ9NUU6 356 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 REV3LO60673 3130 aa18.01■□□□□ 0.47
SMPD4-214ENST00000455548 MYH15Q9Y2K3 1946 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 E9PMD0 336 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 ATF7P17544 494 aaPredicted RBP18■□□□□ 0.47
SMPD4-214ENST00000455548 HOXA11P31270 313 aaPredicted RBP18■□□□□ 0.47
SMPD4-214ENST00000455548 MBTD1Q05BQ5 628 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 SPOUT1Q5T280 376 aaKnown RBP18■□□□□ 0.47
SMPD4-214ENST00000455548 CALML4Q96GE6 196 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 IFT74Q96LB3 600 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 CASD1Q96PB1 797 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 LMAN2LQ9H0V9 348 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 RNF19AQ9NV58 838 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 CLIC4Q9Y696 253 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 A0A0C4DFX4 3053 aa18■□□□□ 0.47
SMPD4-214ENST00000455548 UNC80Q8N2C7 3258 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 TSPAN1O60635 241 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 NAMPTP43490 491 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 PTPAQ15257 358 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 CSPP1Q1MSJ5 1256 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 TMEM119Q4V9L6 283 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-214ENST00000455548 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 KCNK18Q7Z418 384 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 LRRC43Q8N309 656 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 PNMA5Q96PV4 448 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 TIPINQ9BVW5 301 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 TYW1Q9NV66 732 aaKnown RBP17.99■□□□□ 0.47
SMPD4-214ENST00000455548 PCDHB12Q9Y5F1 795 aa17.99■□□□□ 0.47
SMPD4-214ENST00000455548 MORC2Q9Y6X9 1032 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-214ENST00000455548 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 LAG3P18627 525 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 AMHR2Q16671 573 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 CLLU1OSQ5K130 101 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 FAM173BQ6P4H8 233 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMPD4-214ENST00000455548 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 DEPTORQ8TB45 409 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 HELQQ8TDG4 1101 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 BSNDQ8WZ55 320 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 PRIMPOLQ96LW4 560 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 MRPL9Q9BYD2 267 aaKnown RBP17.98■□□□□ 0.47
SMPD4-214ENST00000455548 PRMT7Q9NVM4 692 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-214ENST00000455548 PCDHB2Q9Y5E7 798 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 MYH11P35749 1972 aa17.98■□□□□ 0.47
SMPD4-214ENST00000455548 BRWD1Q9NSI6 2320 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 EFNA5P52803 228 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 FAM187BQ17R55 369 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 TIGD5Q53EQ6 642 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 UBXN11Q5T124 520 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 RINT1Q6NUQ1 792 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 GLB1LQ6UWU2 654 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 C1orf186Q6ZWK4 172 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
SMPD4-214ENST00000455548 SYT2Q8N9I0 419 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-214ENST00000455548 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 PLIN2Q99541 437 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 RUSC1Q9BVN2 902 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 CWH43Q9H720 699 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 SRPRBQ9Y5M8 271 aaKnown RBP17.97■□□□□ 0.47
SMPD4-214ENST00000455548 CNTNAP2Q9UHC6 1331 aa17.97■□□□□ 0.47
SMPD4-214ENST00000455548 CARNS1A5YM72 827 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 HIP1RO75146 1068 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 PLA2G4BP0C869 781 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 ARF4P18085 180 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 GUCY2CP25092 1073 aa17.96■□□□□ 0.47
SMPD4-214ENST00000455548 MARCKSP29966 332 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-214ENST00000455548 CEBPZQ03701 1054 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms