RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
PDXDC1-204ENST00000455313 SUCLA2Q9P2R7 463 aaPredicted RBP18.34■□□□□ 0.53
PDXDC1-204ENST00000455313 EXOC7Q9UPT5 735 aa18.34■□□□□ 0.53
PDXDC1-204ENST00000455313 PES1O00541 588 aaKnown RBP18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 MAGEB2O15479 319 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 GJB1P08034 283 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 ABCD1P33897 745 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 MFSD10Q14728 455 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 MAN2A1Q16706 1144 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 MARCH8Q5T0T0 291 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 CEP135Q66GS9 1140 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 LINC01465Q8N7H1 131 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 UPF3AQ9H1J1 476 aaKnown RBP18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 DMAC2Q9NW81 257 aa18.33■□□□□ 0.52
PDXDC1-204ENST00000455313 SLC16A3O15427 465 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 PGK1P00558 417 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 TPM2P07951 284 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 HSPA6P17066 643 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SCP2P22307 547 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 DNM2P50570 870 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 CYP2J2P51589 502 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 PURAQ00577 322 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 MTHFD1LQ6UB35 978 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 CCDC186Q7Z3E2 898 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 RHPN2Q8IUC4 686 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SLC9A9Q8IVB4 645 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 TRIM59Q8IWR1 403 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 PXYLP1Q8TE99 480 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 LMBR1Q8WVP7 490 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 ZNF830Q96NB3 372 aaPredicted RBP18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 CGNQ9P2M7 1197 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 IMPACTQ9P2X3 320 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 HAS3O00219 553 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 HNRNPDLO14979 420 aaKnown RBP18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SMIM10L2AP0DMW4 78 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SMIM10L2BP0DMW5 78 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 PSEN2P49810 448 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 MAP2K1Q02750 393 aaPredicted RBP18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 UBXN1Q04323 297 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 ARHGEF6Q15052 776 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 RNF149Q8NC42 400 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 PPP1R13LQ8WUF5 828 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 CBWD1Q9BRT8 395 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 PHLPP2Q6ZVD8 1323 aa18.32■□□□□ 0.52
PDXDC1-204ENST00000455313 SNRPFP62306 86 aaKnown RBP18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 GNASQ5JWF2 1037 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 CDCA2Q69YH5 1023 aaPredicted RBP18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 TMEM174Q8WUU8 243 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 SPC25Q9HBM1 224 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 NRCAMQ92823 1304 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 SCN10AQ9Y5Y9 1956 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 ANKRD63C9JTQ0 380 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 ADAMTS4O75173 837 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 SRGAP2CP0DJJ0 459 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 EPB41P11171 864 aaKnown RBP18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 STRN3Q13033 797 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 VWA3BQ502W6 1294 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 ARMCX5Q6P1M9 558 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 SLC39A4Q6P5W5 647 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 FRMD5Q7Z6J6 570 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 NLRP4Q96MN2 994 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 BEGAINQ9BUH8 593 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 KATNAL1Q9BW62 490 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 NDST4Q9H3R1 872 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 XPNPEP3Q9NQH7 507 aa18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 ARMCX3Q9UH62 379 aaPredicted RBP18.31■□□□□ 0.52
PDXDC1-204ENST00000455313 RRN3P2A6NIE6 340 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 K7ERI5 159 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 ADSSP30520 456 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 NKX3-2P78367 333 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 BICD1Q96G01 975 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 MKNK1Q9BUB5 465 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 PCIF1Q9H4Z3 704 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 EXOC3O60645 756 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 TMOD1P28289 359 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 PSMC2P35998 433 aaKnown RBP18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 EFNA5P52803 228 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 FAM186BQ8IYM0 893 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 SLAIN1Q8ND83 568 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 ZNF668Q96K58 619 aaPredicted RBP18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 TMEM134Q9H6X4 195 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 HSPBP1Q9NZL4 362 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 FRMD4BQ9Y2L6 1034 aa18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDXDC1-204ENST00000455313 TRIP12Q14669 1992 aaPredicted RBP18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 ITIH6Q6UXX5 1313 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 ASAP2O43150 1006 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 KPNA6O60684 536 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 EDN1P05305 212 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 PRMT2P55345 433 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 TFDP1Q14186 410 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 NFRKBQ6P4R8 1299 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 BORCS6Q96GS4 357 aa18.29■□□□□ 0.52
PDXDC1-204ENST00000455313 CCDC113Q9H0I3 377 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms