RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 MTRQ99707 1265 aa10.55□□□□□ -0.72
CDC42EP3-203ENST00000453555 ATP6V0A4Q9HBG4 840 aa10.55□□□□□ -0.72
CDC42EP3-203ENST00000453555 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
CDC42EP3-203ENST00000453555 PPME1Q9Y570 386 aa10.55□□□□□ -0.72
CDC42EP3-203ENST00000453555 PCDHB6Q9Y5E3 794 aa10.55□□□□□ -0.72
CDC42EP3-203ENST00000453555 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
CDC42EP3-203ENST00000453555 GRM6O15303 877 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 LYPLA2O95372 231 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 SPATA31C1P0DKV0 1188 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 TRAPPC10P48553 1259 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 FAM189BP81408 668 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 TFF2Q03403 129 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 LAMTOR4Q0VGL1 99 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 PTGDRQ13258 359 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 ORC2Q13416 577 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 PTPROQ16827 1216 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 CATSPER4Q7RTX7 472 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 CATSPER3Q86XQ3 398 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 C4orf32Q8N8J7 132 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 PSPC1Q8WXF1 523 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 CLP1Q92989 425 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 INO80BQ9C086 356 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 ALG13Q9NP73 1137 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 XPNPEP1Q9NQW7 623 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 ANKEF1Q9NU02 776 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 TMEM161AQ9NX61 479 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 PIN4Q9Y237 131 aaKnown RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 RWDD3Q9Y3V2 267 aa10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.54□□□□□ -0.72
CDC42EP3-203ENST00000453555 C5orf67F2Z3F1 127 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 GAS2O43903 313 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 USO1O60763 962 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 RB1P06400 928 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 RARRES1P49788 294 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 LONRF3Q496Y0 759 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 LARP1BQ659C4 914 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 FERMT3Q86UX7 667 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 ECHDC2Q86YB7 292 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 RNF149Q8NC42 400 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 ERMNQ8TAM6 284 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 C11orf84Q9BUA3 381 aaPredicted RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 POLR3CQ9BUI4 534 aaPredicted RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 ELAC1Q9H777 363 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 MINDY3Q9H8M7 445 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 TUFT1Q9NNX1 390 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 TYW1Q9NV66 732 aaKnown RBP10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
CDC42EP3-203ENST00000453555 MYH11P35749 1972 aa10.52□□□□□ -0.72
CDC42EP3-203ENST00000453555 A0A0U1RQF3 1178 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 ASAP2O43150 1006 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 DGAT1O75907 488 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 XRCC6P12956 609 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 COL9A1P20849 921 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 RPA1P27694 616 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 CCT6AP40227 531 aaKnown RBP10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 ECM1Q16610 540 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 SRGAP1Q7Z6B7 1085 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 KLHL23Q8NBE8 558 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 ASAP3Q8TDY4 903 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 LPPQ93052 612 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 HLA-CQ95604 372 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 CASD1Q96PB1 797 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 ASB2Q96Q27 587 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 CHST12Q9NRB3 414 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 RNF19AQ9NV58 838 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 DACT1Q9NYF0 836 aa10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 TDRD15B5MCY1 1934 aaKnown RBP10.52□□□□□ -0.73
CDC42EP3-203ENST00000453555 PP2D1A8MPX8 630 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 ITGB1P05556 798 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 ATF7P17544 494 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 DNAJB1P25685 340 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 ARL2P36404 184 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 PHKA2P46019 1235 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 KCNQ1P51787 676 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 CAPSQ13938 189 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 MXD4Q14582 209 aaPredicted RBP10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 IL17AQ16552 155 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 RILPL1Q5EBL4 403 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 TCEAL5Q5H9L2 206 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 CLLU1OSQ5K130 101 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 HAUS3Q68CZ6 603 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 LRRC55Q6ZSA7 311 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 EP400NLQ6ZTU2 488 aa10.51□□□□□ -0.73
CDC42EP3-203ENST00000453555 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms