RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 KRI1Q8N9T8 703 aaKnown RBP22.12■■□□□ 1.13
COL9A3-202ENST00000452372 RNF149Q8NC42 400 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 ASAP3Q8TDY4 903 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 ADAM2Q99965 735 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 GPRC5CQ9NQ84 441 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 RGS18Q9NS28 235 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 DAXXQ9UER7 740 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-202ENST00000452372 COG5Q9UP83 839 aa22.12■■□□□ 1.13
COL9A3-202ENST00000452372 DENND3A2RUS2 1198 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 PPP6R2O75170 966 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 UPP2O95045 317 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 FGFR4P22455 802 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 SFPQP23246 707 aaKnown RBP eCLIP22.11■■□□□ 1.13
COL9A3-202ENST00000452372 PTENP60484 403 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 FAM102BQ5T8I3 360 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 CRIPAKQ8N1N5 446 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 EPSTI1Q96J88 318 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 CFAP45Q9UL16 551 aa22.11■■□□□ 1.13
COL9A3-202ENST00000452372 ZSCAN20P17040 1043 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-202ENST00000452372 PHKA2P46019 1235 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 CAPSQ13938 189 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 AAK1Q2M2I8 961 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 SPECC1Q5M775 1068 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 RINT1Q6NUQ1 792 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 USP49Q70CQ1 688 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 SLC24A5Q71RS6 500 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 IFNLR1Q8IU57 520 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-202ENST00000452372 SYT2Q8N9I0 419 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-202ENST00000452372 HLA-CQ95604 372 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 NFKBIZQ9BYH8 718 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 MINDY3Q9H8M7 445 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 CHST12Q9NRB3 414 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 C1orf112Q9NSG2 853 aa22.1■■□□□ 1.13
COL9A3-202ENST00000452372 PLA2G4BP0C869 781 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 SLC12A3P55017 1021 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 FAM189BP81408 668 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 DNM1Q05193 864 aaKnown RBP22.09■■□□□ 1.13
COL9A3-202ENST00000452372 KARSQ15046 597 aaKnown RBP22.09■■□□□ 1.13
COL9A3-202ENST00000452372 EPC2Q52LR7 807 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 C1orf186Q6ZWK4 172 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 CATSPER4Q7RTX7 472 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 FBXO22Q8NEZ5 403 aa22.09■■□□□ 1.13
COL9A3-202ENST00000452372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-202ENST00000452372 C9IYK1 514 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 LINC00271P0C7V0 271 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 PLCG1P19174 1290 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 SARSP49591 514 aaKnown RBP22.08■■□□□ 1.13
COL9A3-202ENST00000452372 PCBP1Q15365 356 aaKnown RBP eCLIP22.08■■□□□ 1.13
COL9A3-202ENST00000452372 RASSF8Q8NHQ8 419 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 KIFAP3Q92845 792 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 RUSC1Q9BVN2 902 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 RNF216Q9NWF9 866 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-202ENST00000452372 CCDC39Q9UFE4 941 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 NLRC5Q86WI3 1866 aa22.08■■□□□ 1.13
COL9A3-202ENST00000452372 SSBP05455 408 aaKnown RBP eCLIP22.07■■□□□ 1.12
COL9A3-202ENST00000452372 STAG3L1P0CL83 205 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 TXLNAP40222 546 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 NPAS4Q8IUM7 802 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 KCNG4Q8TDN1 519 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 LRRC15Q8TF66 581 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 YME1L1Q96TA2 773 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 TIPINQ9BVW5 301 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 RC3H2Q9HBD1 1191 aaKnown RBP22.07■■□□□ 1.12
COL9A3-202ENST00000452372 POLD4Q9HCU8 107 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 BLOC1S4Q9NUP1 217 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 DACT1Q9NYF0 836 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 KCND2Q9NZV8 630 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 RCOR1Q9UKL0 485 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 COL4A6Q14031 1691 aa22.07■■□□□ 1.12
COL9A3-202ENST00000452372 CUTAO60888 179 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 GUCY2CP25092 1073 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 DDIT3P35638 169 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 PPP2R5AQ15172 486 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 TMEM192Q8IY95 271 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 DAW1Q8N136 415 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 BSNDQ8WZ55 320 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 RAD54LQ92698 747 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 TRAIPQ9BWF2 469 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 ELAC1Q9H777 363 aaKnown RBP22.06■■□□□ 1.12
COL9A3-202ENST00000452372 AGPAT5Q9NUQ2 364 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 PCDHB7Q9Y5E2 793 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 ATP6V1DQ9Y5K8 247 aa22.06■■□□□ 1.12
COL9A3-202ENST00000452372 LRRIQ4A6NIV6 560 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 H3BNC9 293 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 INO80B-WBP1J3KQ70 363 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 HIP1RO75146 1068 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 DGKIO75912 1065 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 NAMPTP43490 491 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 MBTD1Q05BQ5 628 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 CDCA2Q69YH5 1023 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-202ENST00000452372 ZNF689Q96CS4 500 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-202ENST00000452372 MRPL38Q96DV4 380 aaKnown RBP22.05■■□□□ 1.12
COL9A3-202ENST00000452372 IFT74Q96LB3 600 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 SAMD11Q96NU1 681 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 LRFN2Q9ULH4 789 aa22.05■■□□□ 1.12
COL9A3-202ENST00000452372 PIN4Q9Y237 131 aaKnown RBP22.05■■□□□ 1.12
COL9A3-202ENST00000452372 A0A0U1RQF3 1178 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 HOXA11P31270 313 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-202ENST00000452372 NUCB2P80303 420 aa22.04■■□□□ 1.12
COL9A3-202ENST00000452372 ARSHQ5FYA8 562 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms