RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
LINC01004-202ENST00000450686 CEP89Q96ST8 783 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 VN1R3Q9BXE9 311 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 GBP3Q9H0R5 595 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 SPG21Q9NZD8 308 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 CEP131Q9UPN4 1083 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 HCFC2Q9Y5Z7 792 aa11.44□□□□□ -0.58
LINC01004-202ENST00000450686 CCDC196A0A1B0GTZ2 297 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 DDX11L8A8MPP1 907 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 EML1O00423 815 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 SLC37A4O43826 429 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 PSMD10O75832 226 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 SSBP05455 408 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 MYBP10242 640 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 EPCAMP16422 314 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 IFNAR1P17181 557 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 TMOD1P28289 359 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 AFF1P51825 1210 aaKnown RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 SIGLEC14Q08ET2 396 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 TMEM184AQ6ZMB5 413 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 RHPN2Q8IUC4 686 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 KREMEN2Q8NCW0 462 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 CDCA3Q99618 268 aaPredicted RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 GJB4Q9NTQ9 266 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 DNAJB4Q9UDY4 337 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 PUF60Q9UHX1 559 aaKnown RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 KCNJ14Q9UNX9 436 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 PIN4Q9Y237 131 aaKnown RBP11.43□□□□□ -0.58
LINC01004-202ENST00000450686 LZTS1Q9Y250 596 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 C2orf16Q68DN1 1984 aa11.43□□□□□ -0.58
LINC01004-202ENST00000450686 PLXNA3P51805 1871 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 A0A0U1RQF3 1178 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 HOXA2O43364 376 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 BRD1O95696 1058 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 CXCL14O95715 111 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 PHKA2P46019 1235 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 JAK3P52333 1124 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 NPEPPSP55786 919 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 KRT17Q04695 432 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 SMC1AQ14683 1233 aaKnown RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 NPY5RQ15761 445 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 TWF2Q6IBS0 349 aaKnown RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 BMP8AQ7Z5Y6 402 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 TEX2Q8IWB9 1127 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 VPS52Q8N1B4 723 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 MRPL43Q8N983 215 aaKnown RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 CCDC148Q8NFR7 591 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 BICD2Q8TD16 824 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 RIT2Q99578 217 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 RNF26Q9BY78 433 aaPredicted RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 AGXT2Q9BYV1 514 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 NGRNQ9NPE2 291 aaKnown RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 WRAP73Q9P2S5 460 aaPredicted RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 RIF1Q5UIP0 2472 aaKnown RBP11.42□□□□□ -0.58
LINC01004-202ENST00000450686 ARID2Q68CP9 1835 aa11.42□□□□□ -0.58
LINC01004-202ENST00000450686 DENND4AQ7Z401 1863 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 H0Y858 1186 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 SRGAP2BP0DMP2 458 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 PPM1AP35813 382 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 SLC11A1P49279 550 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 PTPN5P54829 565 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 INF2Q27J81 1249 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 Q4G0T1 1027 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 PDE12Q6L8Q7 609 aaKnown RBP11.41□□□□□ -0.58
LINC01004-202ENST00000450686 B3GNT9Q6UX72 402 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 TMC5Q6UXY8 1006 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 ANO5Q75V66 913 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 ZNF280BQ86YH2 543 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 ETNPPLQ8TBG4 499 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 OXER1Q8TDS5 423 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 CASP10Q92851 521 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 TMEM143Q96AN5 459 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 GCOM2Q9BZD3 368 aaPredicted RBP11.41□□□□□ -0.58
LINC01004-202ENST00000450686 ZBP1Q9H171 429 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 KCNH6Q9H252 994 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 NRDE2Q9H7Z3 1164 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 MINDY3Q9H8M7 445 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 TBC1D13Q9NVG8 400 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 PCDHA4Q9UN74 947 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
LINC01004-202ENST00000450686 PTPRZ1P23471 2315 aaPredicted RBP11.4□□□□□ -0.58
LINC01004-202ENST00000450686 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 F8W810 466 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 M0R2N6 131 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 ZBTB39O15060 712 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 AVPR2P30518 371 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 SFNP31947 248 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 ALDH7A1P49419 539 aaKnown RBP11.4□□□□□ -0.58
LINC01004-202ENST00000450686 USP11P51784 963 aa11.4□□□□□ -0.58
LINC01004-202ENST00000450686 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
LINC01004-202ENST00000450686 XKR3Q5GH77 459 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms