RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SKIP12755 728 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
TRA2A-203ENST00000448549 PPP2R5CQ13362 524 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 BMS1Q14692 1282 aaKnown RBP17.41■□□□□ 0.38
TRA2A-203ENST00000448549 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 CES5AQ6NT32 575 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 ZBTB33Q86T24 672 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 JPH2Q9BR39 696 aaPredicted RBP17.41■□□□□ 0.38
TRA2A-203ENST00000448549 ZBP1Q9H171 429 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 NRDE2Q9H7Z3 1164 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 IFT122Q9HBG6 1241 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 KCNMB3Q9NPA1 279 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 CCDC194A0A1B0GVG4 234 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 DTNBO60941 627 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 ZNF623O75123 536 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 OFD1O75665 1012 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 GALTP07902 379 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 WEE2P0C1S8 567 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 RAB27AP51159 221 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 ITIH3Q06033 890 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 DDX53Q86TM3 631 aaKnown RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 C12orf76Q8N812 135 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 BCL7CQ8WUZ0 217 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 SLC7A3Q8WY07 619 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 RSPH1Q8WYR4 309 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 IGSF21Q96ID5 467 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 FAM20AQ96MK3 541 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 PHOX2BQ99453 314 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 PHF20Q9BVI0 1012 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 POMKQ9H5K3 350 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 WRAP73Q9P2S5 460 aaPredicted RBP17.4■□□□□ 0.38
TRA2A-203ENST00000448549 DNAJB4Q9UDY4 337 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 NR2E1Q9Y466 385 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 PCDHB2Q9Y5E7 798 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 COL4A3BPQ9Y5P4 624 aa17.4■□□□□ 0.38
TRA2A-203ENST00000448549 SRGAP2CP0DJJ0 459 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 SCRN1Q12765 414 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 RARS2Q5T160 578 aaKnown RBP17.39■□□□□ 0.37
TRA2A-203ENST00000448549 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 KANK3Q6NY19 840 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 NEK8Q86SG6 692 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 ZNF280BQ86YH2 543 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 TMEM143Q96AN5 459 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 NECTIN4Q96NY8 510 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 AGPAT5Q9NUQ2 364 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 TRIOO75962 3097 aa17.39■□□□□ 0.37
TRA2A-203ENST00000448549 MYH9P35579 1960 aaKnown RBP17.39■□□□□ 0.37
TRA2A-203ENST00000448549 C2CD4DB7Z1M9 353 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 B4GALT3O60512 393 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 DKC1O60832 514 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 CDKL5O76039 1030 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 CTSAP10619 480 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 EPCAMP16422 314 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 SLC11A1P49279 550 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 PTPN5P54829 565 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 VCPP55072 806 aaKnown RBP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 AGMOQ6ZNB7 445 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 PIK3AP1Q6ZUJ8 805 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 KREMEN2Q8NCW0 462 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 OXER1Q8TDS5 423 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 HAS1Q92839 578 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 DHX33Q9H6R0 707 aaKnown RBP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 MINDY3Q9H8M7 445 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 BMP2KQ9NSY1 1161 aaPredicted RBP17.38■□□□□ 0.37
TRA2A-203ENST00000448549 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 IRAK3Q9Y616 596 aa17.38■□□□□ 0.37
TRA2A-203ENST00000448549 CARNS1A5YM72 827 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 MARCH6O60337 910 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 PDGFBP01127 241 aaPredicted RBP17.37■□□□□ 0.37
TRA2A-203ENST00000448549 GCFC2P16383 781 aaKnown RBP17.37■□□□□ 0.37
TRA2A-203ENST00000448549 MTHFRP42898 656 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 AFF1P51825 1210 aaKnown RBP17.37■□□□□ 0.37
TRA2A-203ENST00000448549 LAMTOR4Q0VGL1 99 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 TCF15Q12870 199 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 GIT2Q14161 759 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 EPHA7Q15375 998 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 SLC22A17Q8WUG5 538 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 PSPC1Q8WXF1 523 aaKnown RBP17.37■□□□□ 0.37
TRA2A-203ENST00000448549 RIPOR3Q96MK2 946 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 PRRX2Q99811 253 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 LXNQ9BS40 222 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 VN1R3Q9BXE9 311 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 WDFY4Q6ZS81 3184 aa17.37■□□□□ 0.37
TRA2A-203ENST00000448549 ZBTB39O15060 712 aa17.36■□□□□ 0.37
TRA2A-203ENST00000448549 DDHD2O94830 711 aa17.36■□□□□ 0.37
TRA2A-203ENST00000448549 XBP1P17861 261 aa17.36■□□□□ 0.37
TRA2A-203ENST00000448549 AVPR2P30518 371 aa17.36■□□□□ 0.37
TRA2A-203ENST00000448549 HOXA11P31270 313 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms