RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ASAP3Q8TDY4 903 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PAGE5Q96GU1 130 aa9.13□□□□□ -0.95
PTPN3-204ENST00000446349 PRMT7Q9NVM4 692 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-204ENST00000446349 H7C4K7 107 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 TCP11X2Q5H9J9 407 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 PRR5LQ6MZQ0 368 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CEP57Q86XR8 500 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CD302Q8IX05 232 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CHMP6Q96FZ7 201 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 MEIS1O00470 390 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 ZRANB2O95218 330 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SEC24BO95487 1268 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 DEUP1Q05D60 604 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 EHHADHQ08426 723 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SLC15A2Q16348 729 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SWSAP1Q6NVH7 229 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 ANTXR1Q9H6X2 564 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SP110Q9HB58 689 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 KLHL8Q9P2G9 620 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF521Q96K83 1311 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 NVLO15381 856 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 BUB1O43683 1085 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 BFSP2Q13515 415 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 GTF2H3Q13889 308 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 DCAF4L1Q3SXM0 396 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 MYRIPQ8NFW9 859 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 VCPKMTQ9H867 229 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CCL15-CCL14A0A0B4J2E2 113 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 KPNA7A9QM74 516 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SLC26A2P50443 739 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 CCL15Q16663 113 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 QRICH1Q2TAL8 776 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 MEI1Q5TIA1 1274 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 C4orf22Q6V702 233 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 GUF1Q8N442 669 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 ENAHQ8N8S7 591 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 DIP2BQ9P265 1576 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 LRRD1A4D1F6 860 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 RASGRF2O14827 1237 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 TTC8Q8TAM2 541 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 DNAJC17Q9NVM6 304 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 AGO2Q9UKV8 859 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 SNX2O60749 519 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 MT-ND3P03897 115 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 IGKV5-2P06315 115 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 ATP6V1E1P36543 226 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 ADCY2Q08462 1091 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 PSMD6Q15008 389 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 LXNQ9BS40 222 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 UTP6Q9NYH9 597 aaKnown RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 RBAKQ9NYW8 714 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-204ENST00000446349 PCDHB7Q9Y5E2 793 aa9.12□□□□□ -0.95
PTPN3-204ENST00000446349 COBLO75128 1261 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 KRT38O76015 456 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 CD58P19256 250 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 PRDM5Q9NQX1 630 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 DCDC2CA8MYV0 355 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF197O14709 1029 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 C6orf118Q5T5N4 469 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 THNSL1Q8IYQ7 743 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ASIC4Q96FT7 647 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 MYO1DO94832 1006 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ARL4CP56559 192 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 BASP1P80723 227 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 CDR2Q01850 454 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ILF2Q12905 390 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ERO1BQ86YB8 467 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 KIF12Q96FN5 646 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ZWILCHQ9H900 591 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF70Q9UC06 446 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 SUN2Q9UH99 717 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 SLC1A1P43005 524 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 OSTNP61366 133 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 KCNB1Q14721 858 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 C16orf86Q6ZW13 317 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 PYROXD1Q8WU10 500 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 PSMB7Q99436 277 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 RIT2Q99578 217 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 PARVAQ9NVD7 372 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 USP42Q9H9J4 1324 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 SCARF1Q14162 830 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 TMEM132BQ14DG7 1078 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ALS2CLQ60I27 953 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 RUBCNQ92622 972 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ELP3Q9H9T3 547 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 LY9Q9HBG7 655 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 SUCLA2Q9P2R7 463 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 TRIM33Q9UPN9 1127 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 PYGLP06737 847 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 HUNKP57058 714 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 MTMR2Q13614 643 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms