RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PDGFDQ9GZP0 370 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 ARMT1Q9H993 441 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 ZMAT3Q9HA38 289 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 SCOCQ9UIL1 159 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 USP18Q9UMW8 372 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 GPR52Q9Y2T5 361 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 SNX13Q9Y5W8 968 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 A0A088AWK7 358 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 THBS2P35442 1172 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 IL12RB1P42701 662 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 CCT5P48643 541 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 IZUMO3Q5VZ72 239 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 RNF43Q68DV7 783 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 TLDC1Q6P9B6 456 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 MILR1Q7Z6M3 343 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 OR2I1PQ8NGU4 316 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 ZSCAN18Q8TBC5 510 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 NETO1Q8TDF5 533 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 APIPQ96GX9 242 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 MYLK2Q9H1R3 596 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 C14orf93Q9H972 538 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 TPSG1Q9NRR2 321 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 STAP2Q9UGK3 403 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 ZC3H7BQ9UGR2 993 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 PALD1Q9ULE6 856 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 PCDHB1Q9Y5F3 818 aa4.91□□□□□ -1.62
CDC42BPA-207ENST00000441725 A0A087WV62 115 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 PRRT4C9JH25 899 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 GLI4P10075 376 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 AOAHP28039 575 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 WASP42768 502 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 MCAMP43121 646 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 KIR2DL1P43626 348 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 KIR2DL2P43627 348 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 CCDC157Q569K6 752 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 KLHDC10Q6PID8 442 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 LIX1LQ8IVB5 337 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 TRIM48Q8IWZ4 208 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 FATE1Q969F0 183 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 HDAC10Q969S8 669 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 RGMAQ96B86 450 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 CDC5LQ99459 802 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 FOXB1Q99853 325 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 METTL22Q9BUU2 404 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 BTBD1Q9H0C5 482 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 MTG2Q9H4K7 406 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 AGO4Q9HCK5 861 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 KMT5AQ9NQR1 393 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 TPCN1Q9ULQ1 816 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 PCDHGB2Q9Y5G2 931 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 PCDHA13Q9Y5I0 950 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 SNX11Q9Y5W9 270 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 SCINQ9Y6U3 715 aa4.9□□□□□ -1.62
CDC42BPA-207ENST00000441725 NISCHQ9Y2I1 1504 aa4.9□□□□□ -1.63
CDC42BPA-207ENST00000441725 TMEM265A0A087WTH1 108 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 LRRC14BA6NHZ5 514 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 STT3AP46977 705 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 ROM1Q03395 351 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 PPP3CAQ08209 521 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 NFIAQ12857 509 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 NOLC1Q14978 699 aaKnown RBP eCLIP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 CCDC184Q52MB2 194 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 GLB1L3Q8NCI6 653 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 NUP43Q8NFH3 380 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 GAB3Q8WWW8 586 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 SEC14L1Q92503 715 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 SYTL4Q96C24 671 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 CDK5RAP3Q96JB5 506 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 MPP4Q96JB8 637 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 EIF2AK1Q9BQI3 630 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 ISCA1Q9BUE6 129 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 OSBPL1AQ9BXW6 950 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 LRRC27Q9C0I9 530 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 DENND2AQ9ULE3 1009 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 TAF6LQ9Y6J9 622 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 NFIBO00712 420 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 EFEMP2O95967 443 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 GSPT1P15170 499 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 TSHRP16473 764 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 PRKCAP17252 672 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 MAPK9P45984 424 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 MAPK10P53779 464 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 GPSM2P81274 684 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 ZNF543Q08ER8 600 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 DBPQ10586 325 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 RSPO4Q2I0M5 234 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 MUM1L1Q5H9M0 696 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 RALGPS1Q5JS13 557 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 HIBCHQ6NVY1 386 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 GAREM2Q75VX8 874 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 MIGA2Q7L4E1 593 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 DCP2Q8IU60 420 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 SHKBP1Q8TBC3 707 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 ADAMTS10Q9H324 1103 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 STARD7Q9NQZ5 370 aa4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.89□□□□□ -1.63
CDC42BPA-207ENST00000441725 POM121BA6NF01 834 aa4.88□□□□□ -1.63
CDC42BPA-207ENST00000441725 M0R3H8 397 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms