RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 DIXDC1Q155Q3 683 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 FAM26FQ5R3K3 315 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 SPATA31D4Q6ZUB0 917 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 DNAJC10Q8IXB1 793 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 C4orf33Q8N1A6 199 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TBCKQ8TEA7 893 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 C1orf54Q8WWF1 131 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 KRT35Q92764 455 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 C9orf72Q96LT7 481 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TMX4Q9H1E5 349 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 MMADHCQ9H3L0 296 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TXLNGQ9NUQ3 528 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 AJAP1Q9UKB5 411 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 SLC4A7Q9Y6M7 1214 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 IGSF9BQ9UPX0 1349 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 MYH7BA7E2Y1 1941 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CFAP69A5D8W1 941 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TXNDC9O14530 226 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TDP2O95551 362 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 AFPP02771 609 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 NR2F2P24468 414 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TFAP4Q01664 338 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 ZBTB16Q05516 673 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 KLRC3Q07444 240 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CALCOCO2Q13137 446 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TMED1Q13445 227 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 DBN1Q16643 649 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 MTHFD1LQ6UB35 978 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 ZDHHC24Q6UX98 284 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 DSTYKQ6XUX3 929 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 HS2ST1Q7LGA3 356 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 NT5DC3Q86UY8 548 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 VPS36Q86VN1 386 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 VPS52Q8N1B4 723 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 SLC35G2Q8TBE7 412 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 ALG3Q92685 438 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CENPTQ96BT3 561 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 ARHGEF26Q96DR7 871 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 BTBD6Q96KE9 485 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 PHF12Q96QT6 1004 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 TTC1Q99614 292 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CCSER1Q9C0I3 900 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CTTNBP2NLQ9P2B4 639 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 C4AP0C0L4 1744 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 C4BP0C0L5 1744 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 RIPK2O43353 540 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 THAP12O43422 761 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 FOXN2P32314 431 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 MAGEA10P43363 369 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 RASSF2P50749 326 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 NEK3P51956 506 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CTSWP56202 376 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 USP46P62068 366 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 KPNB1Q14974 876 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 GALNTL6Q49A17 601 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 DCAF12L1Q5VU92 463 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 BRINP3Q76B58 766 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 GBP7Q8N8V2 638 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 ANKLE1Q8NAG6 615 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 RDH13Q8NBN7 331 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 STMN2Q93045 179 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 MCUR1Q96AQ8 359 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 PGM2Q96G03 612 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 DCAF5Q96JK2 942 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 C7orf25Q9BPX7 421 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 CDC42EP4Q9H3Q1 356 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 NPHS2Q9NP85 383 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 UBN1Q9NPG3 1134 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 DNAAF2Q9NVR5 837 aaKnown RBP8.08□□□□□ -1.12
HDAC9-214ENST00000441542 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 WASF2Q9Y6W5 498 aa8.08□□□□□ -1.12
HDAC9-214ENST00000441542 AKAP12Q02952 1782 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 SMCO2A6NFE2 343 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 E9PMD0 336 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 KIAA0391O15091 583 aaKnown RBP8.07□□□□□ -1.12
HDAC9-214ENST00000441542 SKIP12755 728 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 GNAZP19086 355 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 CHKAP35790 457 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 COASYQ13057 564 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 GRB10Q13322 594 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 MTMR2Q13614 643 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 P3H1Q32P28 736 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 TAF1BQ53T94 588 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-214ENST00000441542 CGB2Q6NT52 195 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 CCDC137Q6PK04 289 aaKnown RBP8.07□□□□□ -1.12
HDAC9-214ENST00000441542 VSTM1Q6UX27 236 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 NSMFQ6X4W1 530 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 PPP4R3CPQ6ZMV5 832 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 UNC13DQ70J99 1090 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 SLC25A41Q8N5S1 370 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 LRRC57Q8N9N7 239 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 PPFIBP2Q8ND30 876 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
HDAC9-214ENST00000441542 NAP1L3Q99457 506 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms